Prunus mume (Japanese apricot): 103333992
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Entry
103333992 CDS
T03196
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00040
Pentose and glucuronate interconversions
pmum01100
Metabolic pathways
Module
pmum_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103333992
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
103333992
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
103333992
NCBI-ProteinID:
XP_008235125
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Position
LG6:929640..932499
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AA seq
483 aa
AA seq
DB search
MSMGNMAIARRSSAKAIILLGLALLSCVADGVSRGHLFKASARRSVTDTNRKVFDVTAFG
AKTEDQMKGGKSTVAGAKLDLPSLPGDDEKVDDEKMDSSEEEAGPGEAGPGESPSDDNAS
AFIKTWVAACRGNYSGPTKVLIPKGTFMTGPVIFQGPCTSSKEPIIVEVEGYVKASTDLS
LYASPEWFTFEMIDGLIVTGEGTFDGQGESTWKSSGCKDKSSCAQAPSSLKFNHVNNTLV
EGITSLNSKFFHAHIYGCSNLTMNNVHITAPDDSPNTDGVHISTSTNVKVLNSVIGTGDD
CVSIGQGSNDILVNNITCGPGHGISVGSLGKRIDDKSVSQIHVSNCTLRNTTNGARIKTW
AAESGGEASDITYENIVMDQVQIPIVIDQNYGKKKPKSGTGPVGGAASKWKISNVHFRNI
RGTSSRNIAVSLQCSSSNPCDGIEMADINFSYLGAAVKDTALTTECYNAKIAPKGVQIPP
LCR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgggaaatatggccattgcaaggagatcatcagccaaggctattattcttctt
ggcttagctttgctttcttgcgtggccgatggcgtatcccgtggacatcttttcaaggca
agtgcccgtcgtagcgttacagataccaataggaaagtatttgatgtcacagccttcggt
gctaagaccgaagaccagatgaaaggaggtaagagcaccgtagctggtgccaagctcgat
ttaccgtcgttgccgggtgatgatgagaaggtggatgacgagaagatggactcttcagaa
gaggaagcaggcccaggtgaagccggccctggtgaaagccctagtgatgacaatgcatcg
gcattcatcaagacatgggtagctgcatgtagaggaaactactctggtccaacaaaggtt
ttgattcccaaagggacatttatgacagggcctgtgatatttcaagggccatgcaccagc
tcaaaggagccaatcatagttgaagttgagggatatgtgaaagccagcactgatctcagt
ctatacgcgtctccagaatggtttacatttgagatgattgacggtttgatagtcaccggt
gaaggcactttcgacggtcaaggtgagagtacatggaaaagcagtggctgcaaggacaag
tccagctgcgctcaagccccatcttctcttaagttcaaccatgtgaacaacaccctggtc
gaggggatcacttccttgaacagcaagttcttccacgcccacatctatggctgcagcaac
ttgacgatgaacaacgtccacattactgctccagatgatagccctaacacagatggcgtg
cacataagcacttcaactaatgtcaaagtccttaatagcgttatcggaaccggtgatgac
tgtgtttccatcggccagggctcgaacgacatccttgtcaacaacatcacttgtggccca
ggacatggcatcagtgtggggagccttgggaagcgcatagacgacaagagcgtgagccag
atccatgtgagcaactgcacattgagaaacaccaccaatggtgccagaatcaagacctgg
gctgcggaaagtggaggagaagcaagcgatattacctacgaaaacattgtcatggatcag
gttcaaattccaattgtgattgatcaaaactacggaaagaagaagccgaagtctggaact
ggcccagttggtggggcggcatcaaagtggaagattagcaacgttcatttcagaaacatc
aggggaacctcgtccagaaatattgccgtctccttacaatgcagttcttcaaacccttgt
gacgggattgagatggccgacattaacttctcctacctgggcgccgctgtgaaggacacg
gcccttaccactgaatgttacaatgccaaaattgcacccaagggcgtacagattccacca
ctctgccgctaa
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