Prunus mume (Japanese apricot): 103334158
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Entry
103334158 CDS
T03196
Name
(RefSeq) E3 ubiquitin-protein ligase ATL31-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103334158
Enzymes [BR:
pmum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103334158
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
103334158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-C3HC4_3
Prok-RING_4
zf-Nse
DUF5083
zinc_ribbon_16
zf-RING-like
RINGv
Motif
Other DBs
NCBI-GeneID:
103334158
NCBI-ProteinID:
XP_008235322
LinkDB
All DBs
Position
LG1:16792004..16793605
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AA seq
376 aa
AA seq
DB search
MRGLIKSFSLLMLLLAFPYAINAQATQELQNNNGYGDLSTFSSSMAMILVFLVCTFFLMA
FFIICIRRCAEAADIESAGTAAPATVTLRRGLDPAVIKTFPILVYSAVKDLKIGKGALEC
AVCLGEFDDYETLRLLPKCDHVFHPDCIDAWLAAHVTCPVCRANLSAESNSRVPEPHNDP
NLESSSTTSQIEVGEARNDAVVVNVYENQSGDPQAVETVNRTRTARSGISGKFPRSHSTG
HSLSQLGGNTERYTLRLPEEVRRQLISLGINKLRRSNSYDVILPRLESSRKGYRCGGGEA
KSNVDNQTGWFDSWVLLRTPSFLARGSSVTFKSPKGGGGDGDGVFGKTPLRSVKTPFDCL
NAKAERSKESISQLPL
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggactgataaagagcttcagcctcctcatgctcttgcttgccttcccttacgcc
attaatgcgcaggccacccaggaattacagaacaacaacggctatggcgacctctccact
ttctcctcatccatggccatgatccttgttttcctcgtatgcaccttcttcttgatggcc
ttcttcatcatctgcattcgccgctgcgccgaggctgcagacatcgaatccgccggaacc
gcagctcctgccaccgttactctccggcgaggcctcgaccctgccgtgatcaagactttc
ccgatcctcgtctactctgccgtcaaggatctcaagatcgggaagggagctctggagtgc
gcggtgtgcttgggcgagttcgacgactacgaaacgctgcgtttgctgccgaagtgcgat
cacgtcttccacccagactgcatcgacgcctggttagcagctcacgtgacgtgtccggtt
tgccgcgccaatctctcggccgagtcgaactcgcgagttcctgagccacacaacgatccg
aatctggaaagttcgagtacgacgagccagattgaagtcggtgaggctcggaacgacgcc
gtcgtggtcaatgtgtatgaaaatcagagcggcgacccacaagcggttgagactgttaac
cgtacacgtacagcgaggtcgggaatctctggaaagttccccagatcgcactcgacgggt
cactcactgagtcaactcggagggaacacggagcggtacaccttgagactgccagaggag
gtgaggagacagctgatttcgctcgggataaataagctgagacgttcgaatagctacgac
gtcattttgcctcgccttgagagttcgaggaaggggtataggtgcggcggcggtgaagcg
aaaagcaatgtggataatcaaaccgggtggttcgactcatgggttttgttaagaacgccc
tcgtttttggctagggggagttccgttacctttaagtctcctaagggaggaggcggtgac
ggagatggcgtgtttgggaagacgccgttaaggtctgttaaaacgccgttcgattgtctg
aatgcgaaggcggagaggtccaaagaatcgatatctcagcttcctctttga
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