KEGG   Prunus mume (Japanese apricot): 103334338
Entry
103334338         CDS       T03196                                 
Name
(RefSeq) sm-like protein LSM5
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03018  RNA degradation
pmum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103334338
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103334338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmum03019]
    103334338
   03041 Spliceosome [BR:pmum03041]
    103334338
Messenger RNA biogenesis [BR:pmum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103334338
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     103334338
Spliceosome [BR:pmum03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    103334338
SSDB
Motif
Pfam: LSM DUF7452
Other DBs
NCBI-GeneID: 103334338
NCBI-ProteinID: XP_008235513
UniProt: A0ABM0P7N3
LinkDB
Position
LG6:2665000..2667067
AA seq 87 aa
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITPEGR
RITKLDQILLNGNNIAILVPGGSPEPE
NT seq 264 nt   +upstreamnt  +downstreamnt
atggccaacaatccctcacagctactcccatcagagttgatcgaccggtgcatagggtcg
aagatatgggtgataatgaagggagacaaggagctcgtcgggactctgaggggatttgat
gtctacgtcaacatggttctagaagacgtcactgaatatgagattactcctgaaggaaga
cgtataaccaagcttgatcagatattgctcaacggaaacaacattgccattctggtccct
ggcggctcacctgaaccggaatga

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