Prunus mume (Japanese apricot): 103334346
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Entry
103334346 CDS
T03196
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00040
Pentose and glucuronate interconversions
pmum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103334346
Enzymes [BR:
pmum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103334346
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
103334346
NCBI-ProteinID:
XP_008235520
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Position
LG6:2871765..2876474
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AA seq
448 aa
AA seq
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MRARSSATMGVSLNLFSLLSTMVLLLALFVSAENEKLVNSRFVGTEELQSSKSSSMADWS
DEALNEHAVDNPDEIASMVDMSIRNSTERRNLGFFSCATGNPVDDCWRCDPHWQLHRKRL
ANCGIGFGRNAVGGRDGKYYVVNNPRDDDPINPRPGTLRHAVIQDQPLWIVFKRDMVITL
KQELIMNSFKTIDGRGVNVHIAYGACITVQFITNVIIHGLHIHDCKPTGNAMVRSSPSHY
GWRTIADGDGISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVMLLG
HSDSYTRDKLMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTIN
SQGNRYLAPNNAFAKEVTHRVETNNNWKHWNWRSEGDLLLNGAYFIASGAGAAGSYARAS
SLGAKSSSMVGTITAGAGVLNCRRGYQC
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagagctaggtcttcagcgacaatgggggtctctctgaacttgttttctttactttca
acaatggtgcttcttctagctctgtttgtgagcgcagagaatgaaaagcttgtaaattca
aggtttgtcggaacagaggagttacagagctccaagagttcatcaatggcagactggtct
gatgaggctttgaatgagcatgcagtggataatccagatgagattgcctctatggttgac
atgagcattcggaatagcacggagaggagaaatttgggatttttttcatgcgcaacggga
aaccccgttgatgattgttggagatgtgacccccattggcaactccaccgcaaacgccta
gccaactgcggcattgggtttgggcgcaatgccgtgggcggccgcgacgggaagtactat
gtcgtgaacaaccctcgcgatgacgacccaatcaaccctaggcccggaaccctccgccac
gcggtcatccaagaccagccgttgtggattgtgttcaagcgtgacatggtgatcacactg
aagcaagagctcataatgaacagcttcaagaccattgatgggcgtggggtcaatgtccac
attgcatatggagcgtgcatcaccgttcaattcataaccaacgtcatcatccacgggctg
cacatccatgattgcaagcccacaggaaatgccatggtccggagctcaccgagtcattat
ggatggaggacaattgctgatggggatgggatttccatttttgggtccagccacatttgg
atagatcataattctctttccaattgtgctgatgggctcattgatgctataatgggctca
actgcaattaccatctccaacaattactttacgcaccacaatgaggttatgttattgggt
cacagtgactcttacacaagggacaagctaatgcaagtgaccattgcctacaatcatttt
ggtgaggggctaattcaaaggatgccaaggtgtaggcacgggtatttccatgtggtgaac
aatgactacacacattgggaaatgtatgccattggtggaagtgctgaacccaccattaat
agccagggcaacagatatctggctcccaacaatgcctttgccaaggaggtgacacataga
gttgaaacaaataacaactggaagcactggaactggagatcagaaggagacctgctgctc
aatggagcctatttcattgcatcaggagctggagctgcaggcagctatgccagggcctca
agcttaggggccaagtcatcttccatggttggcaccatcacagctggtgctggtgttctt
aattgcaggaggggttaccaatgttaa
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