Prunus mume (Japanese apricot): 103334426
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Entry
103334426 CDS
T03196
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103334426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103334426
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103334426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
103334426
NCBI-ProteinID:
XP_008235616
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All DBs
Position
LG6:3513504..3516671
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AA seq
434 aa
AA seq
DB search
MDSDEGKLFIGGLAWDTTEDKLTDYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFSDPSVL
DRVLNDKHTIDGRVVEAKKALSREEQQTSNRSGNFNTTRSSGGGGNFKTKKIFVGGLPST
LTEDGFRQFFENYGTVTDVVIMYDQNTQRPRGFGFITFDTEDAVDRVLHKNYHELNGKLV
EVKRALPKDANPGGGGRGGGFQGYNASGASTNAFDGRMDGNRYMQPQTTAGGFPPYSGYG
APGYGYGAANAGVGYGGYGSYGLGGYGSANTGFGGPAGSYGNPNAPNAGYVSGAPAALKS
TWSNQTPSGYGASGYGAAAPWSAPGGSGAPSAPRGQSPSGASGYGNQGYGYGNYGGSYAS
YPGGYGSSGGRGGSTPTSNSGGSASGGEQQGTRGGYMGSGYGDTNGNSGYSNASWRSDPS
QATGGYGGSQSRQA
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggactcagacgaaggtaaactgttcataggagggctggcctgggacaccacagaggac
aagctcaccgactacttcaaccagtacggtgacgtcacccagaccgtcatcatgcgcgac
aagaccactggccggcccaggggcttcggcttcgttgtcttctctgatccctcggtgctc
gatagggtcctcaacgacaagcacaccattgatggccgagtggtggaagcaaaaaaggct
ttatcaagagaagaacagcagacatccaatagaagtggaaattttaataccaccagaagc
tctggtgggggaggaaattttaagaccaagaaaatatttgttggaggattgccttccaca
ctgacagaagatggatttcgtcaattctttgaaaattatggcactgtcactgatgtagta
ataatgtatgaccagaatactcaacgaccccgtggttttggtttcataacatttgatact
gaagatgcagttgatagagtactacacaagaactaccatgagttgaatggtaaacttgta
gaggtaaagcgagcacttcctaaagatgcaaatcctggtggtgggggccgtggtgggggt
tttcaaggttacaatgcctctggtgccagtacaaatgcatttgatggccgcatggatggc
aataggtacatgcagccacaaactacagcaggtggtttccctccatattctggttatggt
gcgccagggtatggttatggggcggcaaatgctggggttggttatggaggttatggaagt
tatggtcttggtggttatggaagtgccaatactggttttggtggtcctgcaggatcatat
ggaaatccgaatgcccctaatgctggttatgttagtggggcacctgctgcattgaaaagt
acttggagcaaccaaactccttctgggtatggtgcttctggttatggggctgcagctcct
tggagtgctcctggtggaagtggtgctccttctgctccaagaggtcaatccccaagtggg
gcctctggttacggaaatcaaggttatgggtatggaaattatggcgggagttacgcttct
tatcctggtggatacgggagctctggtgggcgtggtggaagtaccccaactagcaactct
ggtggtagtgctagtggtggagagcaacaagggacccgtggtggctacatggggagtggc
tatggcgacaccaatggaaattcagggtactctaatgcatcatggagatctgatccttca
caggccactggtggctatggtggttctcagtccaggcaggcctaa
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