Prunus mume (Japanese apricot): 103334511
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Entry
103334511 CDS
T03196
Name
(RefSeq) poly [ADP-ribose] polymerase 1 isoform X1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103334511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmum03032
]
103334511
03036 Chromosome and associated proteins [BR:
pmum03036
]
103334511
03400 DNA repair and recombination proteins [BR:
pmum03400
]
103334511
Enzymes [BR:
pmum01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
103334511
DNA replication proteins [BR:
pmum03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
103334511
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
103334511
DNA repair and recombination proteins [BR:
pmum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
103334511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
zf-PARP
PARP_reg
PADR1_N
Zn_ribbon_PADR1
WGR
BRCT
BRCT_2
BBS7_hp
Motif
Other DBs
NCBI-GeneID:
103334511
NCBI-ProteinID:
XP_008235714
LinkDB
All DBs
Position
LG6:complement(4058722..4066153)
Genome browser
AA seq
992 aa
AA seq
DB search
MANPQPPKPWKVEYAKSSRSSCKTCKSPIEKEKLRLGKMVTATQFDGFMPMWNHADCIMK
KAKQIKSTDDVEGLELLRWEDQKEIRNYVQSGGPPDTITTVTTTSKVSSGIEVSPTSRAT
CKSCSQKILKAEVRISTKPEGQGPRGLAWHHANCFMELSPSTEVEKLSGWETLPVADQAA
VRALVKKVPSNARGGKKTKEQEDKEFLQQSTPSTSTKRRKDSGGDQKSKVARSEGDVSTS
WDVSARDATDLESKLEAQTKELWALKDNLKKHVTTAELREMLEANVQDSTGSELDLRERC
ADGMMFGALSRCPICSGFLRYSGGMYRCHGYISEWSKCSYSTEEPERLKWKWKIPEDTDN
QYLNKWFKSQKVEKPVRILPPLTPNKPSGSQAFNGQSQSSNSASLADLKVAFRGLPKESM
EEWSRKIEDVAGLVHSKIKKDTNCLVVSGALDDKDAEMRKARRMKLPIVREDYLVDCFKK
QKKLPFDLYKVEVVGVASSMVTVKVKGRSAVHESSGLQDTCHILEDEKSIYNTTLSMSDL
STGVNSYYILQIIQDDKSSDCYVFRKWGRVGNDKIGGNKLEEMLKSDAICEFKRLFLEKT
GNSWEAWEQKQNFQKQPGRFFPLDIDYGVNKQVSKKNQNNAASKLAPPLAELMKMLFNVE
TYRAAMMEFEINMSEMPLGKLSKSNIQKGFEALTELQNLLNSNGHPPSMKESLIVDASNR
FFTVIPSIHPRVIRDEDDFKSKVKMLEALQDIEIASRLVGFDADTDDSLDEKYRKLRCDI
DPIPHDSEDFRLIKKYLLTTHAPTHTDWSLELEEVFALEREGEFDKFAPYRKKLNNRMLL
WHGSRFTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCYTDKKNPVGLML
LSEVALGEVHELKKATYMDKPPKGKHSTKGLGKKIPQESEYVKWKDDVIVPCGKPVPSNI
KASELMYNEYIVYDKAQVKMQFLLKVRFHHKR
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccctcagcccccgaagccatggaaggtggagtatgccaagtcatcgagatca
tcatgcaagacctgtaaatcccccattgagaaagagaagcttcgcctcggcaagatggtc
acggccacccaattcgacggcttcatgcctatgtggaaccatgctgattgcataatgaag
aaagcaaagcagataaaatcaaccgatgatgttgaaggcctagagctccttcgttgggaa
gatcagaaggaaattagaaattatgtacaaagtggaggacccccagatacaataacaaca
gtaacaacaacaagcaaggtcagtagtggtattgaagtttcaccaacttctcgtgctact
tgcaagagctgcagccaaaagattttaaaagcagaggtccgtatatcaaccaagcctgaa
ggtcaaggacctaggggcctggcatggcaccatgccaactgtttcatggaattatcacca
tccactgaagtggagaagttgtctggatgggagaccctcccagttgctgatcaggcagct
gtacgtgccttggttaagaaggttccttctaatgcaagaggtggcaagaaaactaaggaa
caagaggataaagaatttctgcaacagtcaactcctagcactagcacaaaacgaagaaaa
gatagtggtggtgatcagaagtcaaaagttgctaggtcggaaggagatgtgtcaacgagc
tgggatgtgtccgcgagggatgctactgatctggagagtaaactggaggctcaaactaag
gaactgtgggcactgaaagataatcttaaaaagcatgtgacgactgctgagttgcgtgaa
atgcttgaagcgaatgttcaagattcaacaggatcagagcttgatttgcgtgagcgctgc
gctgatggaatgatgtttggagcacttagtagatgcccaatctgttctggttttcttcgt
tattctgggggcatgtaccggtgccatggctacatatcagagtggagtaagtgttcttac
tctactgaggaacctgaacgccttaaatggaagtggaaaatcccagaagatacagataat
caatatcttaataagtggtttaaatcacaaaaggttgagaaacctgtgcggatactgcct
ccattaacacctaacaaaccttctggaagtcaagctttcaatggccaatctcagtcatct
aacagtgcaagcttggcagatttgaaagttgcttttcgtggattaccaaaagaatccatg
gaagaatggagtagaaaaattgaggatgtagctggactggttcattcgaagatcaagaaa
gatactaattgcttagttgtgagtggagctcttgatgataaggatgctgagatgagaaaa
gcaaggagaatgaaattaccaattgttagggaggattatctggttgattgctttaaaaaa
cagaagaagcttccatttgatctgtacaaagttgaagttgttggtgtagcctctagcatg
gtcactgtcaaagtgaaaggccgaagtgctgttcatgaatcttctggtctgcaagataca
tgtcatatacttgaggatgagaaaagcatctacaatacgaccttaagcatgtctgattta
tcaactggtgttaacagttactacattctccaaattatacaagatgataagagttcagac
tgctatgtgtttcgtaaatggggacgagtggggaatgataaaattggaggtaacaaactg
gaagagatgttgaaatcagatgcgatctgtgaatttaaacgtttgttccttgagaagact
gggaattcgtgggaagcatgggagcaaaaacaaaattttcagaagcaacctggcagattc
tttccattggatattgattatggggttaacaaacaggtttccaagaaaaatcagaacaat
gcagccagcaaactagctcctcctttagcagaattgatgaagatgcttttcaatgttgaa
acatacagagctgccatgatggaatttgagataaatatgtcagaaatgccacttgggaaa
ttgagtaaaagcaatatccaaaaggggtttgaagcattaacggaactacagaatctgttg
aatagtaatggccatcctccttccatgaaagagagcttgattgtagatgcaagcaatcga
tttttcactgtgataccttccatacatccacgtgttattagagatgaggatgattttaag
tcaaaggtgaaaatgctagaagctctccaggacattgaaattgcttccagattagttggt
tttgatgctgataccgatgactcccttgatgagaagtataggaagctccggtgtgatatt
gatccaattcctcatgatagtgaagattttcggttgattaaaaaatatcttcttactact
catgcccctacacatacggattggagccttgagcttgaagaagtttttgctcttgaaagg
gaaggggaatttgataaatttgctccctatcggaaaaagcttaacaacagaatgcttctt
tggcatggttctcggtttacaaattttgtgggcatacttagccaaggactgagaatagct
cctcctgaagctcctgctactggttatatgtttggcaaggggatttactttgctgacctt
gtcagtaagagtgctcagtattgctatacagacaagaagaatcctgtgggcctcatgctt
ctaagtgaagttgccttgggggaggtccatgagctcaagaaggctacgtatatggacaaa
cctcctaaaggaaagcactctacgaaggggcttggcaagaaaatacctcaggagtcggag
tatgtaaaatggaaggacgatgtcatcgtgccttgtggaaaaccagtgccatcaaatatc
aaggcctctgagctaatgtataacgagtacattgtttatgataaagctcaagttaagatg
caattcctgttgaaggtgaggtttcatcacaagaggtga
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