KEGG   Prunus mume (Japanese apricot): 103334781
Entry
103334781         CDS       T03196                                 
Name
(RefSeq) cyclin-H1-1-like
  KO
K06634  cyclin H
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum03022  Basal transcription factors
pmum03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103334781
  09124 Replication and repair
   03420 Nucleotide excision repair
    103334781
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmum03021]
    103334781
   03400 DNA repair and recombination proteins [BR:pmum03400]
    103334781
Transcription machinery [BR:pmum03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     103334781
DNA repair and recombination proteins [BR:pmum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     103334781
SSDB
Motif
Pfam: Cyclin_N Cyclin_C_2 TFIIB RB_B YjcQ
Other DBs
NCBI-GeneID: 103334781
NCBI-ProteinID: XP_008235971
LinkDB
Position
LG6:complement(4890228..4899655)
AA seq 255 aa
MWQSFSRLACWLCLLLVGKYKAANQRAIQTLEKYGATLMEVDVDGTISYPEPQVIAKDNA
DKHSRPKPISIEEEQFMRVFYENKLQEVCKNFHFPHKVQATALIYFKRFYLQWSVMQHHP
KNIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQSLEFDLIVYAPYRSIE
GFIDDMGEFCAINDDRLQILQKLLHGAKMEVDKIMLTDAPLLFPPGQLALAALRSANQVH
KVVEIPEEHSLSSEF
NT seq 768 nt   +upstreamnt  +downstreamnt
atgtggcaaagtttttccagattggcttgctggctgtgtttattgctggtcggtaaatac
aaggctgctaatcaaagagcaatacaaacattggagaagtatggagcaacactaatggaa
gtagatgttgatggcacaatatcataccctgaacctcaagttattgcaaaagataatgct
gacaagcattctcgtccaaaacccattagcattgaagaggagcagtttatgcgggtattt
tatgaaaataaacttcaagaagtgtgcaaaaactttcacttccctcataaagtgcaggca
acagctcttatatatttcaaaaggttttatctacaatggtcggtgatgcaacaccatcca
aaaaatataatgttaacctgtatatatgcggcttgtaaaatagaagaaaaccacgtatca
gcagaggagcttggtaaggggatctcacaggatcatcaaatgatactcaataatgagatg
atagtttatcagagtttggaatttgatcttattgtttatgcaccatatcgctcaattgaa
ggttttatcgatgatatgggggaattctgtgcaataaatgatgatcgactccaaattctg
cagaagttgcttcatggtgcaaagatggaagtggataaaatcatgcttacggatgcacca
cttctattccctcctgggcagttggcattggctgctttgcgtagtgcaaatcaggtgcac
aaagttgttgagatacctgaggagcattctctctcgtcagagttctga

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