Prunus mume (Japanese apricot): 103334863
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Entry
103334863 CDS
T03196
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03015
mRNA surveillance pathway
pmum04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103334863
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
103334863
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmum01009
]
103334863
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103334863
03036 Chromosome and associated proteins [BR:
pmum03036
]
103334863
Protein phosphatases and associated proteins [BR:
pmum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
103334863
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
103334863
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
103334863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
103334863
NCBI-ProteinID:
XP_008236064
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All DBs
Position
LG6:complement(5641253..5643291)
Genome browser
AA seq
470 aa
AA seq
DB search
MGVQNNTPRASPRRKSTTLQHLFDLDSKTATGTNGKKTGTANIGCSSSSNLENEEILSSI
SFCTFVFTFTDPSECATQQELKRNKLLHLLSVVKSSKKPLHDQVMSSLISMISLNLFRPL
PPPSNPSSAAEFPDDEDHTSTFSPLWSHLQLVYDILIRLVINTDPKLLRGYIDNQFVVNL
LALFQSEDPRERDSLKNVYHRIYSRFTFYRSFMRKSMNDVFLHYVFETERHCGIRELLEI
WGSIINGFTVPLKEEHKLFLMRVLIPFHKTKGMQAYHRQLAYCVSQFVQKEPVLGGIVVR
GILRYWPVTNCQKEVLLIGELEELVENIDPDQYRKLALPLCLQITRCLNSWNSQVAERAL
YVWNNEQFVKMISVAMEEVFPVVVEGMEKNLKWHWSKSVRQLTENVKVMLEEMDPVLHSK
CLEEIELRESKAHQAEIKRKEKWDRIEMAAAQHHNQHQFLQPPHFLCVSH
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttcaaaacaacacaccaagagcttcgccaaggagaaaatcaactacccttcaa
cacctctttgatcttgattcaaagactgcaactggtactaatggaaagaagactggcacc
gccaatattgggtgttcttcttcttccaacctggaaaatgaggaaattctttcttctatt
tccttttgcacctttgtcttcaccttcactgatccaagtgaatgtgccacacaacaagaa
ctcaaaaggaacaagcttttgcaccttctgtctgtggtaaaatcctcaaagaagcctctg
catgatcaagttatgtcatctctcatttctatgatatctttgaacctctttaggcctctc
cctcctccttccaatccctccagtgctgcagaattcccggatgatgaagaccacacatct
accttttccccattatggtcacacctgcagttagtttatgacatcctcatccggctcgtg
atcaacacagatcctaagttacttagaggttacattgataaccaatttgttgtcaatctt
cttgccttgttccaatcagaagacccgagggaacgtgatagtttgaagaatgtgtaccac
agaatatattccagattcacattctaccgttcgttcatgaggaaatcgatgaacgatgtg
tttttgcactatgtgtttgagacagagaggcattgtgggattagagagttgcttgagata
tggggaagcatcatcaatggctttacagttccactaaaagaagagcacaagctgttcttg
atgagggtgcttattccttttcacaagaccaaggggatgcaagcttaccataggcagctg
gcttattgtgtgtctcagtttgtgcagaaggagcctgtgcttggtgggattgttgttaga
gggattttgaggtattggcctgtgactaattgccagaaggaggttttgctgattggggaa
ttggaggaactggtggagaatattgaccctgatcaatataggaagttagccctgccttta
tgtctccagataacaagatgcttgaacagttggaactcacaggtagcggagcgagcgctc
tacgtttggaacaacgagcagttcgtaaagatgatatcggtggcaatggaggaagtgttt
ccggttgtggttgaaggcatggagaagaacttaaagtggcactggagcaaaagcgtccga
caattgacagaaaacgtgaaggtgatgctagaagaaatggatccagttttgcactccaag
tgccttgaagaaattgagctcagagaatccaaagctcaccaagcagaaatcaagaggaag
gagaaatgggacagaatagaaatggcagcagcccagcatcacaatcagcatcagttcctc
caaccaccacatttcttatgtgtttcgcattga
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