Prunus mume (Japanese apricot): 103334872
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Entry
103334872 CDS
T03196
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00900
Terpenoid backbone biosynthesis
pmum01100
Metabolic pathways
pmum01110
Biosynthesis of secondary metabolites
Module
pmum_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
103334872
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pmum01006
]
103334872
Enzymes [BR:
pmum01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
103334872
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
103334872
2.5.1.29 geranylgeranyl diphosphate synthase
103334872
Prenyltransferases [BR:
pmum01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
103334872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
103334872
NCBI-ProteinID:
XP_008236079
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All DBs
Position
LG6:complement(5726916..5728600)
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AA seq
337 aa
AA seq
DB search
MASFSMVSTPVHLYLPKKLTFPIRCSSSSSAPSVSTPPSWTQFDLKTYWTTLIADINQKL
HEAVPVRYPDQIYESMRYSVLAEGAKRASPVMCVAACELFGGNRVAAFPTACALEMVHAA
SLIHDDLPCMDDDPSRRGQPSNHTVYGDDLAILAGDALFPLGFQHIVANTPSSLVPEPRL
LRVITEIARTVGSTGMAAGQFLDLEGGPDAIEFAQEKKFGEMSQCSAVCGGLLGGAEDDD
VDRLRRYGRAVGVLYRVVDDILEDKMNGEDEDERKKKKGFSYVRVYGVEKAMEVAEQLRA
KAKQELDGFEKYGDAVVPLYSFVDYAVDRSFTVSDSS
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttctcaatggtttcaactccagtccatctctacctcccaaagaagcttact
ttcccaatccgatgctcttcttcttcatcagcgccgtccgtttcgaccccaccgagctgg
acccagttcgatctgaaaacctactggacgaccctgatagccgatatcaatcagaagctt
cacgaagccgtcccggttcggtacccagatcagatctatgaatccatgcgatactctgtg
ctcgccgaaggagccaaacgagcctcaccggtcatgtgcgtcgctgcttgtgagctcttc
ggcggcaaccgcgtagctgccttccccacagcctgtgctcttgaaatggtacacgcagct
tcactcattcacgatgatcttccatgcatggatgacgacccatcacgccggggccagccc
tcgaaccatacagtctatggcgacgatctggcaattctagctggtgatgctctgtttcca
ttggggtttcagcacattgtggcaaacacgccttccagcctcgtgcccgagccacgcctc
ctgcgcgtgatcacagagattgcgcgcaccgtggggtccacgggcatggcggcagggcag
ttcctcgacctggaaggcgggccggatgctatcgaattcgcgcaggagaagaagtttggg
gagatgagtcagtgttctgctgtttgtggaggattgctaggtggtgctgaagatgatgat
gtggatagactgaggaggtatggcagagctgttggggttttgtatcgggtggttgatgat
attttggaggacaaaatgaatggtgaggatgaggatgagcggaagaagaagaaaggcttc
agctatgtgagagtttatggggttgagaaggctatggaggtggcagagcagcttagagcc
aaagctaagcaggaattggatggatttgagaagtatggtgatgctgtggtgccactttac
agctttgtggattatgctgttgatagaagttttactgtcagtgactcaagttga
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