Prunus mume (Japanese apricot): 103335405
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Entry
103335405 CDS
T03196
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmum03041
]
103335405
Spliceosome [BR:
pmum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103335405
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR
PPR_2
PPR_3
PPR_long
PPR_1
ARM_TT21_N
WRNPLPNID
Motif
Other DBs
NCBI-GeneID:
103335405
NCBI-ProteinID:
XP_008236630
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All DBs
Position
LG6:9040754..9043768
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AA seq
830 aa
AA seq
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MLPSRPPKLPLSTLSLTHSSFTFFSSLFSSNPKTKPLPMRSSLSLLRSLTLSLSHHHYHP
THRLPRPISGFPLAVAAKSRRVLALPSSSTFVEHLSGEVSQPGENWDLSNVAQGEAFDLD
KCFSSADLKHLAVPELEVPELEDLPEQWRRSKLAWLCKELPAHKAGTLSRILNAQKKWMR
QEDATYVAVHCMRIRENDVGFRVYKWMMQQHWYRFDFALATKLADYMGKERKSSKCRDIF
DDIINQGRVPSESTFHILVVAYLSASVQGCLEEACGIYNRMIQLGGYQPRLSLHNSLFKA
LVSKPGTSSKHYLKQAEFIFHNLVTTGLEIHKDIYSGLIWLHSCQDTIDKERMTSLRKEM
QQAGIEVGRDVLVSILRACSKEGDVEEAESTWLKLLHLDVGLPSQAYVYKMEAYSKAGEP
RRSLEIFREMQEQLGSANAVAYHKVIEVLCKAQEVELAESLMTDFINIGLKTFMPSYIDL
MNMYFNLGSHDKLESAFFQCLERCRPSRTIYSIYLDSLVKVGNLDKAEEIFDQMQRNGAT
GINARSCNTILSGYLSSGDYVKAEKIFDLMCQKKYDVDSPLMEKIDYVLSLSRKVVKRPV
SLKLSKEQREVLVGMLLGGLQIESDEDRKNHMIRFEFSENSSTHSLLRRHMYDQYHEWLH
PSCKTSESTDDIPYKFSTISHSCLGFYADQFWPKGRQVIPKLIHRWLSPCALAYWYMYGG
HRSSSGDILLKIKGNEEGVEKIVRALKAKSLDCKVKRKGRVFWIGFLGSNSTWFWKLVEP
YILDDLKHLLKGGQISDNSAVETENVNFGSGSDTDENASESDHTDNDNNL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcttccgagtagacctccaaagctcccactctccactctctctctaacccactcctcc
ttcactttcttctcctccctcttctcctcaaaccctaaaactaaacccctccctatgcgc
tcttctctctccctcctccgctccctcacgctttctctctcacaccaccactaccaccct
acccaccgactcccgagacccatctctggtttcccgctcgccgtcgccgccaaatcccgc
cgggtactcgcgcttccctcttccagtactttcgtcgaacacctttcgggcgaggtctcg
cagccgggggagaattgggatttgagcaatgttgcgcagggcgaggctttcgacttagat
aagtgcttttcttcagccgacttgaagcacctggcggttccggagcttgaggttccggag
ctcgaggacctcccggagcagtggcgaaggtcgaagctggcttggctttgtaaggaactg
ccggcgcataaggccggcacgttgagtcggatactcaatgcgcagaaaaagtggatgagg
caagaagatgccacttatgttgcagtgcattgtatgcgaattcgcgaaaatgatgtcggg
tttagggtgtacaaatggatgatgcaacaacattggtatcgttttgattttgctcttgct
accaagttagcagattacatgggtaaagagcgaaaatcctcaaagtgtagggatatattt
gatgatataattaatcagggccgtgtgcctagtgaatctacatttcatatattggttgtt
gcatatcttagtgcatcggttcaaggttgcttggaggaagcatgtggcatttacaatcgt
atgattcagttgggaggctaccagccccggcttagcttgcacaattctctcttcaaagcc
cttgtcagcaaacctggaacctcttcgaagcattaccttaaacaggctgagtttattttt
cataatttggtaacaactggacttgagattcacaaggatatttatagtggcttaatctgg
ctacatagttgtcaggataccatagataaagagaggatgacatcattaaggaaagaaatg
caacaagctggaattgaggtgggcagagatgtgcttgtgtctatcttgagagcttgctca
aaggagggggatgtggaggaagcagaaagtacttggctcaaacttctccaccttgatgtt
ggtctcccatctcaggcatatgtttataaaatggaagcctattcaaaggctggagaacct
aggagatccctggagatattcagggagatgcaagaacagttgggttcagccaatgctgtg
gcatatcataaagtcatagaggtcttatgtaaagctcaagaagttgaacttgcagagtcc
ctcatgacagatttcatcaacatcggtttgaagactttcatgccatcttatattgatcta
atgaacatgtatttcaacttaggctcacatgacaaattggaatcagctttcttccagtgc
cttgagagatgtcgacccagccgtacgatttattctatatacttggattctttggtgaaa
gttggtaatcttgataaagctgaggagatctttgaccaaatgcagaggaatggggcaact
ggtattaatgctcggtcctgcaacaccatattaagcggatacctatcatctggagattat
gtcaaggcagaaaaaatatttgatctgatgtgccagaagaaatatgatgttgactcccca
ttgatggaaaagattgactatgtcttgagcttgagcagaaaagtagttaagagacctgta
agcctgaagctgagcaaagaacaacgagaagttttagtaggtatgctgttgggtggtttg
cagattgagtcagatgaagacaggaagaatcacatgatccggtttgagttcagtgagaat
tctagcacacattctctgttaaggagacatatgtatgatcaataccacgagtggctacat
ccttcttgtaaaaccagtgagagtactgacgacataccatataaattttcaaccatctca
cattcttgtttaggtttctatgcggaccagttttggccaaaaggtagacaggtgattcca
aagctaatccatagatggttgtcaccctgtgctcttgcctactggtatatgtatgggggc
cacaggtcttcatcaggtgacatattgttgaagataaagggaaatgaagagggtgttgag
aagattgtcagagccttgaaggcaaagtccctggattgcaaggtgaagaggaaggggaga
gttttttggattggttttctgggaagtaattctacctggttctggaaattagtagaacct
tatattctagatgacttgaagcatcttttaaaaggtggccaaatctcagataacagcgcg
gttgaaactgaaaacgtcaactttggtagtgggtctgatactgatgagaatgcttctgaa
tctgatcacactgataatgataataatttgtag
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