Prunus mume (Japanese apricot): 103335510
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Entry
103335510 CDS
T03196
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03020
RNA polymerase
pmum03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103335510
09124 Replication and repair
03420 Nucleotide excision repair
103335510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmum03021
]
103335510
03400 DNA repair and recombination proteins [BR:
pmum03400
]
103335510
Transcription machinery [BR:
pmum03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
103335510
DNA repair and recombination proteins [BR:
pmum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
103335510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Glyco_transf_99
DUF5446
Motif
Other DBs
NCBI-GeneID:
103335510
NCBI-ProteinID:
XP_008236745
LinkDB
All DBs
Position
LG6:complement(9857565..9859682)
Genome browser
AA seq
116 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREDHTIGNILRMQLHRDENVLFAG
YKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLKSCFEAEVAKHSVEY
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccccagatcgatacgaaagatttgttgtccctgaaggcaccaaaaaggtgtca
tatgagagggacacaaagatcataaacgcagcatcctttacaattgagagagaggaccac
accattggaaacatcctccgcatgcagttgcacagggatgagaatgttctatttgccggt
tacaagcttcctcacccccttcagtacaagattattgtcaggattcacaccaccagccag
tcttcaccaatgcaggcatataaccaggctattaatgatcttgacaaggaacttgaccat
ttaaagagttgttttgaggctgaggtggcaaagcattcagtggagtactaa
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