Prunus mume (Japanese apricot): 103335541
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Entry
103335541 CDS
T03196
Name
(RefSeq) protein CASP
KO
K09313
homeobox protein cut-like
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmum03000
]
103335541
Transcription factors [BR:
pmum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
103335541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CASP_C
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
103335541
NCBI-ProteinID:
XP_008236778
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All DBs
Position
LG6:complement(10026037..10034098)
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AA seq
683 aa
AA seq
DB search
MEAPQGGSDRDKSSSSSSPISVVSNFWKEFDLEKEKSVLDEQGLRIAENQENSQKNRRKL
AESTRDFKKASPEEKLNLFNSLLRGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYLA
LASSAEQDLKLSELESENRKMKVELEEFRTEATHLKNQQATIRRLEDRNRQLEQQMEDKV
KEIVEIKQRSFAEENQKMLEVLKEREQLLQDQLRQAKDSVFNMQKLHELAQSQLFELRAQ
SDEERATKQSEVNLLMDEVERAQTRLLSLEREKGLLRSKLDTANEDTENKNSDTSDSNSI
LENSLIAKEKIIAELNMELHNIETTISKEREEHLNEIKKLNTLLIEKEAALEEMKKELQA
RPTTKLVDDLRKKVKILQAVGYNSIEAEDWEVATSGEEMSKMESLLLDKNRKMEHELTQL
KVKLSEKASLMEKADGKTAELTVKVNEQQKLIQKLEDDILKGYSSKDKKGILFDDWDLSE
ARSTEVSENADQKHVSSDQDQSSMLKVICNQRDRFRTRLRETEEEIRQLKERIGALTAEL
EKTKADNVKLYGKIRYVQDYSLEKVVSRGSKKPAEDLESGFSSDVESKYKKIYEDDINPF
AAFSKKERDQRYKELGFRDRITLSSGRFLLGNKYARTFAFFYTIGLHILVFTCLYRMSAL
SYLSNGQEDVIIGDKQLNLPHAL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggaggctccgcaaggcggatccgacagagacaaatcgagctcctcctcttctcccatc
tccgtcgtctccaatttctggaaagaatttgatttggagaaggaaaaaagtgtactggat
gagcaagggctcaggatagctgaaaatcaagaaaacagccagaagaataggcggaagctt
gcagagagcactagagatttcaagaaagcttcaccagaggaaaagctaaatctttttaac
tctttacttagaggttaccaagaagaagttgataatcttaccaagagagcaaagtttggg
gagaatgcttttcttaacatctatcaaaaactttacgaggctccggatccttatctggct
cttgcttcaagtgctgagcaagatctgaaattgtctgaattagaatctgagaacaggaaa
atgaaagttgaacttgaagaattcaggacagaagcaactcatttaaagaatcaacaggca
acaataagaagacttgaagaccgcaaccgtcagttagagcaacagatggaggataaagtt
aaagaaattgtggagatcaagcaacgcagttttgcggaagagaaccagaaaatgcttgag
gtcctaaaagaaagagagcaattgttgcaagatcaattacgacaagctaaagacagtgtt
ttcaatatgcagaaattacatgagcttgctcaaagtcaattgttcgagcttcgtgctcaa
tctgatgaagagagggcaacgaagcaatctgaggtcaatcttctgatggatgaagttgag
cgggcccagacacggcttcttagtcttgagagggagaagggacttctgcgctccaaatta
gacacagcaaatgaagacactgaaaataagaacagtgatacttcagattcaaatagcatc
cttgagaattctttaattgctaaagagaagatcatcgccgaactcaacatggaactgcac
aatattgaaacaacaatatcaaaagaaagagaggaacacctgaacgagatcaagaagttg
aacacattgctcattgaaaaggaagctgctctcgaggagatgaagaaagagcttcaggca
aggccaacaacaaaactggttgatgatttgcgtaaaaaggtgaaaattttgcaggcagtg
ggttataattcaattgaggctgaagattgggaagtagccacaagcggggaagagatgagc
aaaatggagtctcttcttcttgataaaaaccggaaaatggagcatgaactcacacagttg
aaagtcaaactttcggagaaagcatcattgatggaaaaagctgatggcaagacagcagaa
cttacagtaaaggttaatgaacaacaaaagttaatccaaaagttggaggatgacatactg
aagggttatagttccaaggataagaaaggaatcctatttgatgactgggatctttcagag
gctaggagcactgaggtgtctgagaatgcagatcaaaagcacgtttcctcggaccaagac
caaagctcaatgcttaaggttatctgtaaccagcgagatcgattcaggacacgcttgaga
gagacagaagaagaaataaggcagttgaaggaaaggataggagcgttaacagcagaactg
gaaaagacaaaagctgataatgttaaactctatggaaagattcgttatgttcaggattac
agtcttgaaaaagtagtttctagaggatcaaaaaagcctgcagaggatcttgaaagtggt
ttctcctcagatgttgaatccaaatacaagaagatatatgaggatgacataaatcctttt
gcagccttctctaaaaaggaaagggatcagaggtacaaggagttgggtttcagggataga
attacacttagcagcggacgctttcttcttggcaacaagtatgctcggacgtttgcattt
ttctacactattgggttgcatatactggtgttcacctgtctctaccgaatgtcagctctg
agctatcttagcaatggtcaggaggatgtaattattggcgataaacaactgaacctccca
catgcgctctag
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