Prunus mume (Japanese apricot): 103335579
Help
Entry
103335579 CDS
T03196
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00500
Starch and sucrose metabolism
pmum01100
Metabolic pathways
pmum01110
Biosynthesis of secondary metabolites
Module
pmum_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
103335579
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pmum01003
]
103335579
Enzymes [BR:
pmum01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
103335579
Glycosyltransferases [BR:
pmum01003
]
Polysaccharide
Storage polysaccharide
103335579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_transf_4
Glyco_trans_4_4
Glycos_transf_1
Motif
Other DBs
NCBI-GeneID:
103335579
NCBI-ProteinID:
XP_008236816
LinkDB
All DBs
Position
LG1:18478070..18486793
Genome browser
AA seq
670 aa
AA seq
DB search
MKALMSSVIIPWQPPPQKPRIPVVCCSTINGSSSSSSEVNLQSSQPQECKSSNDEEPKQS
EIWRLFREAQKNILHLNQHRLKALEDLNKINIEKQLLVDRIEQLELEKQTAVAKPHDRLS
MFWELLLRIDSMVLMGMITTGEASNLRRLVMDHKVSVAEVFNDTLQKSDAEILAELRHFS
ERNQRNGFHIVHVCTEMAPLVSVGSLASYVTGLSCALQRKGHLVEVILPKYSNLDLNEVQ
GLQEIEAECYSYFNGQLHGNRIWTGVVYGIGVTLIQPLYYSSFFNRERVYGYPDDFERFT
YFSRASLDYIVKSGKQPDVIHIHNWETAIIGPLFWDIIVKQGLEGTRVLLTCHDLNSQCL
EHPEKLALCGLDPARLHRPDRLQDTTKAHLVNVLKGGVVYSNKVVIMSSIRSKGRVIHSL
SYGLDHTLNIHKNKVVIAPCGFDNSTWDPSTDKFLPQQYGVKHMKGKAVCKAALQQHLGF
SEHASTILVGCIFSEVSDVDLENLRAVFRKARRIDVQFIIKGIRKISSVNKLGLLHEPLK
DKNVRFIDGHDEKQSHLIFAGSDIILCQSFHDPVLQVPLKALKYGAAPIAVNSNDDGFRN
FVEHDYETTNFSRFISSTFGNMSITQALDEIRNNPSKWKRKIMDAMEMDFSWDAECCDIH
ASAYTAVKNL
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgctgatgagtagtgtgatcatcccttggcaaccacccccccaaaaacctcga
attccagttgtttgctgctccaccattaatgggtcctcatcctcttcctcagaagtgaac
ttacaaagctcccagcctcaggagtgcaagtcatccaatgatgaggaaccgaaacagtcc
gaaatttggcgactcttcagagaagctcagaagaatattctacacttgaaccaacatcgt
cttaaggcgttagaagatcttaacaaaatcaacatagagaaacaactgttggttgatagg
atagagcaattggagctggaaaagcagactgctgttgcaaaacctcatgataggctatca
atgttttgggagctactccttcggatagactcaatggtcctcatgggaatgattaccact
ggggaggcatctaatttgagaaggctggtcatggatcacaaagttagcgtagctgaagta
tttaacgacaccctgcagaagagtgatgctgagattttagcagaactccggcacttctct
gagagaaaccaaaggaatggatttcatattgtccatgtatgcacggaaatggcaccactg
gtctccgttggatctttggcttcatatgtgacaggtttgtcttgtgcactacaaaggaag
gggcatttggtggaggtgatacttccaaagtattcaaacttggatttaaatgaagttcaa
gggctacaggaaattgaggcagagtgttattcgtattttaatggtcagttgcatggcaac
agaatttggactggtgttgtctatggtattggagttactttaattcaaccactatactac
tcatcctttttcaaccgtgagagggtatatggctatccagatgactttgaaaggtttacc
tatttctcccgtgcttcattggattatattgtaaaatctggaaagcaacctgatgtgata
catatccacaactgggagactgctattattgggccacttttctgggatattattgttaaa
cagggacttgaaggtacaagagttctattgacatgccacgacctcaattcacagtgtctt
gagcatccggagaaactagcgttatgtggacttgatcctgctagacttcaccgtcctgat
cgtttgcaagatactaccaaggcacatctggtaaatgttttgaagggtggagttgtttac
tccaataaagttgtcattatgtcatccatacgttcaaaaggcagggttattcatagtctg
agttatgggttggatcataccttaaacattcacaaaaacaaagtggttattgctccttgt
ggatttgacaactccacttgggatccgtctacagacaaatttcttccccaacagtatggt
gtgaagcatatgaaagggaaagcagtctgcaaagctgcattgcagcagcaccttgggttt
tctgagcatgcttctactattcttgtcggatgcatcttctctgaagtatcagatgttgat
ctggagaacctgagggcagtatttcggaaagctaggaggattgacgtgcagttcatcatt
aaggggataagaaaaatatcaagtgtaaacaagctgggattgttgcatgaaccactgaag
gataaaaatgtacgattcatagatggacatgatgaaaagcaatcacatttgatattcgct
ggatctgatattatcttatgccaatcttttcatgatcctgtcctccaagttccactaaag
gctttaaagtacggggccgctccaattgcagtaaactccaatgatgacgggttcaggaac
tttgtggaacatgactatgagaccactaacttctcacgtttcattagctctacttttgga
aatatgtctataacccaagccctggatgaaattagaaacaacccgtcaaagtggaagaga
aagataatggatgccatggaaatggacttctcatgggatgctgagtgctgtgacatccat
gcttctgcttatacagccgtaaagaatttgtga
DBGET
integrated database retrieval system
