Prunus mume (Japanese apricot): 103335669
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Entry
103335669 CDS
T03196
Name
(RefSeq) putative rRNA methyltransferase
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmum03009
]
103335669
Ribosome biogenesis [BR:
pmum03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
103335669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Sugar_tr
Motif
Other DBs
NCBI-GeneID:
103335669
NCBI-ProteinID:
XP_008236913
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Position
LG6:complement(11201417..11208007)
Genome browser
AA seq
848 aa
AA seq
DB search
MGKVKGKHRLDKYYRLAKEHGYRSRASWKLAQLDTKHQFLHSSHAVLDLCAAPGGWMQVA
VQRVPVGSLVVGVDLVPIAPVRGAFSIQQDITKPECTARLRKLMKENGCSAFDLVLHDGS
PNVGGAWSSEATAQNALVVDSVKLATQLLAPKGTFITKIFRSQDYNAVYYCMKELFEKVE
QDKPAASRSSSAETYLLGFKYKAPAKIDPRLLDVKHLFKSVEPQKKVVDVLRGTKQKRHR
DGYEDGDTILRKASSAADFIWSEAPLDILGSVTSINFEGEASLPIKEHALTTEEVQTLCD
DLRVLGKQDFKHLLKWRVQIRKALSPEKANASTAKEVESEENKEDDEDKILNEMEELTYA
MERKKKRTKKLLSKRRAQDKVRKATGMQIDALQDGYTDNELFSLASIKGKKDLVAVDSTE
YDGENGDLGDSENEESHEQTQEASSSDIDSDEERRRYDAQMEDLLDQAYEQYVSKKEGSA
KQRKRIKQANSEDAQLLEDVDGSDMVQSDYESDKEQGGQEKNPLLEALDDGEGPTQEEIT
NNWFSQDIFAEAVEQGDLDKSDSEDEMQVERQEKPSLVGKAKENNAIQNVKKKIENDAAG
SNHHQVQASKAEDDFEIVPAPGTDSSDDSSSDESEDMDIDKKAEILACAKKMLRKKPREH
MLDDAYNKYMFDDEGLPRWFLDEEKRHRQPIKPVTKEEINAMKAQFKEIDARPVKKLAEA
KARKKRVAFRKLEKIRKKANTISDQADISDRSKRKQIEQMYKKAEPKRPQKEYVVAKKGV
QVRVGKGKVRVDRRMKKDARGSGAGKRPGKGNSKKSKSGGKAQKGKGPGKASTKPGKASA
KPGRKGGR
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggtgaagggcaagcatcgtttggacaaatactaccgcctagccaaagagcat
ggctatcgctctagagcctcatggaagctcgctcagctcgacaccaagcaccagttcctc
cactcctctcacgccgtcctcgacctctgcgccgcccccggcggttggatgcaagtcgcc
gtgcagcgcgtgcccgttggcagccttgtcgtcggcgtcgacttggtccccatcgctccc
gtccgtggcgccttctcgatccagcaggacatcaccaagcccgagtgcacggccaggctc
cggaagctgatgaaggagaacggctgctcagctttcgatttggtgcttcatgatgggtcg
cctaatgttggtggggcctggtcttcagaggccactgcgcagaacgccttggttgttgat
tccgtgaagttggctacccagcttttggctcccaaaggcacattcatcaccaaaatcttc
aggtcgcaagattataatgctgtctactattgtatgaaggagttatttgagaaagttgaa
caggataaaccagcagctagtcgtagttcatctgctgagacatatcttttgggttttaag
tacaaggctcctgcaaagattgatccacgtctacttgatgtgaagcatctatttaaatct
gtagaacctcagaagaaggtggtggatgtactaagaggaacaaagcaaaaaagacaccgt
gatgggtatgaagatggcgacacaattttgagaaaagcgtcttcggctgctgacttcatt
tggtctgaggcccctcttgatatccttggttccgttacttccataaactttgagggtgag
gcatctttgcccatcaaggagcacgctttaacaacggaagaggttcaaactctctgtgat
gatttgcgtgttttggggaagcaagatttcaagcatcttttgaagtggcgggtgcagatt
agaaaggccttatctcctgagaaggctaatgcttctactgccaaggaagttgaaagtgag
gagaataaggaggatgacgaagacaaaatactcaatgaaatggaggagctgacgtatgct
atggagcgcaagaagaaacgtacaaagaagcttctatccaaaagacgagctcaggacaag
gtacggaaggcaacagggatgcaaatagatgcactgcaagatggttatactgacaatgag
ttattttctctcgcttccatcaagggtaagaaagatctggtagccgttgattccactgaa
tatgatggtgagaatggtgacctgggagatagtgaaaatgaggaaagccatgaacaaacc
caagaagcatcgtctagtgatatagactctgatgaggaacgccgaagatatgatgcacaa
atggaagaccttctcgatcaggcttatgaacagtatgtgtcgaaaaaggagggaagtgca
aagcagaggaagcgtataaaacaagcaaattctgaagacgctcaacttttggaggatgtt
gatggcagtgatatggttcagtctgactatgagtcagacaaggagcagggtggtcaggaa
aagaatcctcttttggaagcacttgatgacggggaagggcctacccaggaagagattaca
aataactggtttagtcaggatatctttgccgaagctgtagagcagggggatttggataag
tctgatagtgaagatgaaatgcaggttgaaaggcaggagaaaccttccttggtaggaaag
gccaaggagaataatgcaattcaaaatgttaagaaaaagattgaaaacgatgctgcaggg
tccaatcaccatcaagtccaagcttcaaaggcagaggacgattttgagatagtaccggct
cctggtacagattcaagtgatgactcatcatcagatgaatcggaggatatggatattgat
aagaaagccgagatactggcatgtgcaaagaaaatgctgaggaaaaagccaagagaacat
atgcttgatgatgcgtataataagtacatgtttgatgatgagggcttgcccaggtggttt
ttggatgaggaaaagaggcaccgccaaccaatcaaacctgtgaccaaagaagagatcaat
gcaatgaaagcgcaatttaaagaaattgatgcccggcctgtaaagaagttggcagaggct
aaagctcgaaagaagcgggttgcctttaggaagcttgagaagattcgtaagaaggcaaac
acgatatcagaccaggcagacatctctgatcgttcaaagaggaagcaaattgaacaaatg
tataagaaggccgagcctaagaggcctcagaaggagtatgtggttgcaaagaaaggagtg
caagtcagggttggcaagggtaaggtccgtgtcgatcgacggatgaaaaaggatgcaagg
ggtagcggagcgggtaaaaggccaggaaaaggcaattcaaagaaaagtaaaagtggtggc
aaggctcagaaaggcaaggggcctggaaaggcttcaacaaagccaggaaaggcttcggca
aagcccggaaggaagggtggcagatga
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