Prunus mume (Japanese apricot): 103335811
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Entry
103335811 CDS
T03196
Name
(RefSeq) protein RMD5 homolog A-like
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103335811
Enzymes [BR:
pmum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103335811
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
103335811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
103335811
NCBI-ProteinID:
XP_008237061
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Position
LG6:12388522..12392050
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AA seq
388 aa
AA seq
DB search
MELSTIKDAFERVVKKQKLCSSRSQEVIDLVGREIEQALTRLLSAHDPTSPVDYRSILAE
LKLKLNGIGPIHLLEGSHKELNGNLSKYTKFLEKSLNPDISKAYRDVDFDHHIENQLIAN
HFYRQGSFDLGDGIIDEAGEPESTILKSQFVVMHQILEAMKVKNLEPALNWVSANREKLN
QSGSNLELKLHSLQFLEILKKGTQADALKYARTCLAPFASPASPHKEEVLKLMGCLLYPG
RLDSSPYSEFTSPTHWEKSMEDLTRQFCSLLGQSYNSPLSMTIAAGLEGLPTLLKLANVM
AAKKQEWQAMKQLPVPVELGKEFQFHSIFVCPVSRDQSSEENPPMLMPCLHVLCKQSILK
LTKSSTRTFKCPYCPAEASAAQCRQLYF
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggagctaagtaccatcaaagatgcatttgagcgtgttgttaagaagcaaaaattatgt
tcttctagatcccaagaagtaattgacctagttggtcgtgaaattgaacaggcactgaca
cgactcctatcagctcatgatcccacctctcctgttgattatagatctatccttgcagag
cttaaactcaagctcaatggaattggcccaatccacttgttagagggctcacataaggaa
ctaaacggaaaccttagcaagtacactaaattcctggaaaagtccttgaatccagacata
tcaaaggcatacagagatgttgacttcgaccatcacattgagaatcagctgattgccaat
catttttaccggcaaggttcgtttgatctgggagatggcataatagatgaggctggagaa
ccagagtcaaccattctaaaatctcagttcgtggtaatgcatcagatacttgaggctatg
aaggttaagaacctcgagcctgctctgaactgggtctctgctaaccgcgagaaactgaat
cagagtgggtcaaatctcgagcttaaacttcatagtttgcagtttctggagattttgaaa
aagggaactcaagctgatgcacttaaatatgccaggacttgccttgctccttttgcttct
cccgcctcccctcacaaggaagaggtcctgaagctcatgggttgcctgttgtatccagga
aggcttgacagctccccatattctgagtttacatccccaacccattgggagaagtcgatg
gaggatcttacacggcagttctgcagtctgttggggcagtcctataatagcccgttgagt
atgacaatagctgctggattggaagggttgccaactctcttgaagttggcaaatgtaatg
gctgcgaagaagcaggagtggcaggcgatgaaacaattgccagtccctgtggagttgggg
aaggaatttcagttccattcaatatttgtctgtcctgtgagtagagatcaaagcagtgaa
gagaatccgccgatgttgatgccatgtttgcatgttctctgcaagcaatcaatcctgaag
ctgaccaagagcagcacacgaacatttaaatgcccgtattgtccagctgaggcttcagct
gctcagtgccgccagctatatttctga
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