Prunus mume (Japanese apricot): 103335819
Help
Entry
103335819 CDS
T03196
Name
(RefSeq) probable sphingolipid transporter spinster homolog 2
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmum02000
]
103335819
Transporters [BR:
pmum02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
103335819
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MFS_1
OATP
MFS_3
Motif
Other DBs
NCBI-GeneID:
103335819
NCBI-ProteinID:
XP_008237075
UniProt:
A0ABM0PBB2
LinkDB
All DBs
Position
LG6:complement(12205941..12215283)
Genome browser
AA seq
540 aa
AA seq
DB search
MAQKVAKTSEEGKPSAEPAMVIASTAAPAPSWFTPKRLLAIFCVINLLNYVDRGAIASNG
VNGSLGTCTESGVCTSGTGIQGDFNLSNFEDGVLSSAFMVGLLLASPIFASLAKSVSPFR
LIGVGLSVWTFATVGCGFSFNFWSITLCRMLVGVGEASFISLAAPFIDDNAPAPQKTAWL
AIFYMCIPSGYALGYVYGGLVGSHSNWRYAFWGEAILMLPFAILGFVMKPLQLKGFFHPE
STKALTAVETAVSEVQGSDNLNGKDGSFSSKEDLRNSTIQKSSELKVGTKIMNQISRFMK
DMKVLLVDKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMNDADLIFGGITIVCGILG
TLAGGFVLDYINSTISNAFKLLSAVTLLGGVCCFGAFCFKNMYAFLALFAVGELLVFATQ
GPVNYICLHCVKPSMRPLSMAISTVSIHLFGDVPSAPLVGVLQDSINNWRVTALILTXXX
XXXXXXXXXXAGIWFIGIFLHSVDRFNEESENQITTTEKSNTTPLLKGKKTETTESASEP
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaaaagtagcaaagacttctgaagaaggtaagccttcggcagagccagccatg
gtcattgcttcaaccgcagctccggctccttcgtggttcacgcccaagaggttacttgct
atcttttgcgtgattaacttgttaaattatgtggaccgaggagcaatagcaagcaatggt
gtcaatgggagcctcggaacttgtacagaaagtggcgtatgcacatctggtaccgggata
cagggggattttaacttgagcaactttgaagatggagttctctcatcagcttttatggtt
ggacttcttttggcttctcctatatttgcatcattagcaaagagtgtaagtccgtttagg
ctcattggagttggattatcagtttggacctttgctacagttggttgtggtttttcattc
aacttctggtccattactctctgccgcatgttagttggtgttggtgaggcttcatttatt
agtcttgcagctccattcattgatgataatgccccagctcctcagaaaactgcgtggctt
gctatattctatatgtgcataccaagtggatatgcacttggctatgtttatggtgggttg
gttggaagtcattccaattggcgttatgctttttggggggaggcaatcctgatgcttcca
tttgctattctaggatttgttatgaagcctttgcagctgaaaggtttttttcatcctgaa
tcaacaaaagcactaacagcagtggagacggccgtctcagaagttcaaggttcagataat
ttgaatggtaaagatggttccttttccagtaaggaagatctcagaaattctaccatacag
aaatcttctgagctaaaagttgggacaaaaataatgaatcaaatttcaaggtttatgaaa
gatatgaaggtgcttttggttgacaaggtttatgttgttaatgttctaggttatatagca
tacaactttgtcataggtgcatactcatattgggggcctaaggctggttataatatatat
catatgaatgatgcagatttgatatttggaggtattacaattgtgtgcggaatattgggc
acactagcaggaggttttgttctggattatatcaatagcacgatctctaatgctttcaag
cttctttcagcagtaacgttacttggaggagtatgttgcttcggtgccttttgcttcaag
aacatgtatgctttcctagctctttttgcagttggggaactacttgtctttgcaactcag
ggccctgtaaattacatctgtctccattgtgttaaacctagtatgaggccactatctatg
gctatttctactgtttcaattcacctttttggggatgtaccttccgcacctcttgttgga
gttctccaggattccattaacaactggagggtgactgctcttattttaacatnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcaggaatatggtttataggaatctttctg
cacagcgtggatagatttaacgaagaaagtgagaatcagatcacgacaactgaaaagtca
aacacaacaccattgcttaaagggaagaagacagaaacaactgaatctgcctctgaaccc
taa
DBGET
integrated database retrieval system
