Prunus mume (Japanese apricot): 103335890
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Entry
103335890 CDS
T03196
Name
(RefSeq) threonine--tRNA ligase, mitochondrial 1-like
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103335890
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmum01007
]
103335890
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmum03016
]
103335890
Enzymes [BR:
pmum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
103335890
Amino acid related enzymes [BR:
pmum01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
103335890
Transfer RNA biogenesis [BR:
pmum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
103335890
Prokaryotic type
103335890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
tRNA-synt_His
Motif
Other DBs
NCBI-GeneID:
103335890
NCBI-ProteinID:
XP_008237148
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All DBs
Position
LG6:12826321..12836947
Genome browser
AA seq
691 aa
AA seq
DB search
MVVQAKDEAYLEAVIPKRIELFESIQAEQRAARQSLPSSDPIRITLPDGKVKEGKKWITS
PFEIASEISKSLASNALISEVNGVLWDMNRPLEGDAELRLFTLDSFDNNEDVRHTFWHSS
SHILGQALEVEYGCKLCIGPCARIETRHDMCATSKEGFYYDAFYGDFGLNDEHFKQIESW
TEKAVKGKQPFERIEVSREQALEMFCDNKFKVEIINGLPADKTITVYRCGPLVDLCRGPH
IPNTSFVKAFKCLKASAAYWRGNKDRESLQRVYGISYPDKKRLQEHIHKLEEAKKYDHRV
LGKNQELFFFDPVSPGSCFFLPKGARIYNKLMEFIKHQYRERGYEEVISPNLYNMKLWET
SGHAEKYKDNMFSVEIEKQDFGLKPMNCPGHCVMFQHRNRSYRELPLRMADFGVLHRNEA
SGALTGLTRVRRFQQDDAHIFCRESQVKDEVRGVLEFIEYTYNIFGFTFKLKLSTMPESH
MGDLATWKKAEAALKEALIEFGKPWEVNEGDGAFYGPKIDITVSDALSRDHQLATLQLDF
QLPDRFKLYYSAEGEDGKMERPVMIHRAVLGSVERMLAVLLEHYKGKWPFWLSPRQAIVC
PVSHTALPYALQVRDQIHQAGYYVDVDTSDKTIQKKVRQAQIAQYNYILVVGGEEVQNGQ
VSVRVRDKGDVTVMSMESLLQHFKDQVEAFH
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggtggtccaggccaaagatgaagcctacctcgaggctgtcattcccaaacgcattgaa
ctctttgagtccatccaggcagaacaacgtgctgctcgacagtctctcccctcttctgat
cctatcaggattacattgccggacgggaaggtgaaggagggcaagaagtggataacttcc
ccatttgaaattgcaagtgagatttcaaagagtttggcttccaacgctttgatttctgag
gtcaatggggttctatgggacatgaacaggcctttggagggcgatgctgagctgaggctc
ttcacattggactcattcgacaacaatgaggatgtacgccacactttctggcattctagc
tcccacattcttggacaggcacttgaggtcgagtacggatgcaaactctgcatcggtccg
tgtgccagaattgaaacaagacacgatatgtgtgccactagcaaagagggtttctactat
gatgcattttatggagattttggcttgaatgatgaacactttaagcaaatcgaatcatgg
acagagaaggctgttaaggggaaacaaccttttgaacgcattgaagtatcaagggaacaa
gcccttgagatgttttgtgataataaattcaaggttgaaatcatcaatggccttccagcg
gacaaaactataactgtatatagatgtggccctttggttgacttgtgtcgtggaccccac
ataccaaatacatcatttgtcaaagcatttaaatgtttgaaggcttctgcagcctactgg
aggggcaacaaagatcgtgaaagtttgcagagagtttatggaatatcttatcctgataaa
aaacgtttgcaggaacatatccataagctagaagaagcaaaaaaatatgaccacagagtg
ctgggtaaaaatcaggaacttttctttttcgacccagttagcccaggaagctgcttcttc
ctccctaaaggggctcggatttataataaattaatggagttcataaagcatcagtataga
gagaggggatacgaagaggttatatcaccaaacttgtacaatatgaaactctgggaaaca
tctggtcatgctgaaaaatacaaagacaatatgttttcggtggagattgagaaacaggac
ttcggattgaaaccaatgaactgcccagggcactgtgtaatgtttcagcataggaaccgt
tcttatagagaactacctctacgaatggctgattttggggtgttacatcggaatgaggcc
agtggcgcactcactggattaacacgtgtcaggagattccagcaggatgacgctcatatc
ttctgcagggagtcccaagtaaaagatgaagtgaggggtgtcttagagtttattgagtat
acctataatatatttggattcacttttaagctgaagctttcaacaatgccagaaagccac
atgggagacttggcaacatggaagaaggctgaggctgctcttaaagaagctttaattgag
ttcggcaagccctgggaggtgaatgaaggggatggtgcattttatggaccgaagatagat
atcactgtatctgatgcattgagcagagatcatcagttggcaacattacagcttgatttt
caacttcccgaccgctttaagctgtattactcagcagagggtgaagacggcaagatggag
aggcctgttatgatacacagagctgtattaggttctgttgagcgtatgcttgctgtactg
ttggaacactacaaagggaaatggcccttctggcttagtccacgtcaggcaattgtttgc
cctgtgtcgcacacagccctgccttatgctctgcaggtacgggatcagatccatcaggct
ggttattatgtcgatgttgacacaagtgataaaacaattcagaaaaaggtacgacaagct
cagatcgcacagtacaactacattttagttgtgggtggggaggaagttcaaaatggacag
gttagcgtaagggttagagataagggtgatgtgacagtaatgagcatggagagcctacta
caacacttcaaggaccaagttgaagctttccattag
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