Prunus mume (Japanese apricot): 103336245
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Entry
103336245 CDS
T03196
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmum03041
]
103336245
Spliceosome [BR:
pmum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103336245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
Nup35_RRM_2
TGF_beta
Motif
Other DBs
NCBI-GeneID:
103336245
NCBI-ProteinID:
XP_008237509
LinkDB
All DBs
Position
LG6:complement(18408977..18419175)
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AA seq
444 aa
AA seq
DB search
MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALIQMQDTPAAVSALQF
YGNVQPAIRGRNVYVQFSSHQELTTMYQNAQGRGDEPNRILLVTIHHMLYPITVEVLHQV
FFPHGFVEKIVTFQKSAGFQALIQYQSRQSAVAARTALQGRNIYDGCCQLDIQFSNLDEL
QVNYNNERSRDFTNPNLPSEQKGRSPQPGYGDAGGVYGLQGTGARAVGFPQMANAAAIAA
AFGGGLPPGISGTNDRCTVLVSNLNPDKIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQ
MGDGFQSELAVHFLKGAILFGKRLEVNFSKHPNITQGADTHEYMNSNLNRFNRNAAKNYR
YCCSPTKMIHLSSLPQEVTEEEIVNHLEEIGTIVNTKLFEMNGKKQALVLFETEEQATEA
LVCKHATSLGGSIIRISFSQLQGI
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaccttctaaagtcattcatgtccgaaatgtggggcatgaaatttctgaaaat
gatttgctccagctatttcagccatttggagtcataactaagcttgtgatgcttcgtgca
aaaaatcaggctcttatccaaatgcaagatacccctgctgcagtaagtgcactgcaattc
tatggaaatgttcaacctgccataaggggaaggaatgtctatgtccagttctcatcacat
caagaattgacaacaatgtatcagaatgctcaaggacgaggagatgagccaaaccgaatt
ctcttagttacaattcatcacatgctatatcctataacagtggaagttctgcatcaagtg
ttttttcctcatggatttgtagagaagatcgtcacttttcagaagtcagctggttttcag
gccctaatccagtatcagtcacgccagagtgccgttgcagctagaactgcgctgcaggga
cgcaatatttatgatggttgctgtcaattggacattcagttctcaaaccttgacgagtta
caagtgaattacaataatgagcgttcaagagatttcacaaatcccaatttgccttcagaa
cagaaaggaagatccccgcagcctgggtatggtgatgcaggaggcgtgtatggccttcaa
ggtactggagccagggcagttggatttccgcagatggctaatgcggctgcaattgcggcc
gcctttggtggaggtttacctcctggtataagtgggacaaatgacaggtgtacagtcctt
gtctcaaatctcaatcctgataaaatagacgaggataagctttttaacttgttttccata
tatggaaacattgtgagaattaaacttcttcgaaacaaaccagaccatgcacttgtccag
atgggtgatggcttccagtccgaactggcagtacactttctaaagggtgcaatcctgttt
gggaagcgattggaggtcaacttctcaaagcatccgaatataacccaaggtgctgacaca
catgaatacatgaactcaaatctcaaccgcttcaatcgtaatgcagcaaagaactaccgc
tattgctgttcgccaacaaagatgatccacttgtcttctcttccccaggaagtcactgaa
gaggagattgtgaaccacctagaggaaattggtaccattgtaaacacgaagctctttgag
atgaacggaaagaagcaggcattggttctgtttgaaactgaggagcaggccactgaagct
cttgtgtgcaagcatgctacctcgctcggtgggtcaataatccgaatctccttttcgcag
ctacagggaatatga
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