Prunus mume (Japanese apricot): 103336392
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Entry
103336392 CDS
T03196
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 45 homolog
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103336392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103336392
Membrane trafficking [BR:
pmum04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
103336392
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
PCRF
Motif
Other DBs
NCBI-GeneID:
103336392
NCBI-ProteinID:
XP_008237652
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Position
LG6:complement(19690589..19699211)
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AA seq
557 aa
AA seq
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MVLVSAVRDYISRMLQDISGMKVLILDSHTVSIVSVAYSQSELLQKEVFLVELVDSISKS
RESMSHLKAVYFLAPTSENIQYLRRHLVAPRFGEYHLFFSNILKDTQIHILADSDEHEVV
QQLQEFYADFVASDPYHFTLNVPSNHIYMLPAVVDHSNLQRFSDRIVDVLRIFSIESYDN
IINSHTLHXEKLMYQQESGLFDFRRTEISPLLLVIDRRDDPVTPLLNQWTYQAMVHELIG
IQDNKVDLRTIGKFPKDQQEVVLSSEQDGFFKKNMYENFGDIGMNIKQLVDEFQQISKSN
QNIQTIEDMAKFVDNYPEYRKMHGNVSKHVALVTEMSKLVEERKLMLVSQTEQELACNGG
QVAAFEAVTNLLNNESVSDIDRLRLVMLYALRYEKESPVQLMQLFNKLSSKSAKYKPGLV
QFLLKQAGVDKRTGDLYGNRDFLNIARNMARGLKGVENVYTQHQPLLFQTMESITKGRLR
DVDYPFVGNHFQQGRPQEVVIFIVGGTTYEESRSVALQNSMNTGIRFILGGSAILNSKRF
LKDLEEAQRVARISNAV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggtctcagccgtacgggattacataagccggatgttgcaggacatctccggc
atgaaggttctcatcctcgattcccacacggttagtatagtgagtgtggcgtattcgcaa
tccgagcttcttcagaaagaagtgtttttggtggaattggttgactccatttccaagtcc
agagaatccatgtctcatctcaaagccgtttacttccttgcacccacttcagagaatatc
cagtatttgcgccggcacttggttgctcctaggtttggagagtatcacctgtttttctcc
aacatattgaaggatacccagattcatattttagctgattcagatgagcacgaagttgtg
cagcaacttcaggagttctatgcagactttgttgccagcgatccttaccatttcactttg
aatgtgccatcaaatcacatttatatgctcccagcggttgtagatcattcaaatttgcag
cgcttctctgatcgaattgttgatgttttgaggatcttttctattgagagctatgataat
ataataaactcacacacactacactaggagaagctgatgtaccagcaggaaagtggactt
tttgatttcagacgaacagaaatttctccattgttgctggtaattgataggagggatgat
cctgtaaccccattgctgaatcagtggacctatcaggcaatggttcacgaattgattggt
attcaagacaacaaagtggacttaagaaccattggcaaatttccaaaagatcaacaggag
gttgtgctatcatcagaacaagatggttttttcaaaaagaacatgtacgagaactttggt
gatattgggatgaacatcaagcagttggttgatgaatttcagcaaatttcaaagagtaac
cagaacattcagacgatagaggacatggccaaatttgttgacaattaccctgagtacaga
aagatgcatggaaatgtttcaaagcatgtggcactggttacagaaatgagcaaactagtt
gaagagagaaaacttatgttagtttcacagacagaacaggagttggcttgcaatggtggg
caggtggcagcttttgaggcagtgacaaatctattaaacaatgaaagtgtatccgatatt
gatcgcctacgacttgtcatgttgtatgctttgcgctatgagaaggaaagccctgtgcaa
ctgatgcaattatttaacaaactgtcttctaagtctgccaagtacaagcctgggcttgtc
cagtttctcttgaagcaagcgggtgtggataagcgaactggggatctttatggaaatcga
gatttcttaaatattgcacgtaacatggctcgggggttgaagggggttgagaatgtgtac
acacaacaccagcctcttctcttccaaactatggaaagcatcaccaagggacgactgaga
gatgtggactacccatttgttggaaatcactttcagcagggcaggcctcaagaagttgtg
attttcattgttggaggaacaacatacgaggagtctcgctctgtagctttacaaaattct
atgaatactggaattcgttttatacttggtggttctgcgattctcaattctaagaggttc
ttgaaagatttggaagaagctcagagagtagctcggattagcaatgccgtctga
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