Prunus mume (Japanese apricot): 103336511
Help
Entry
103336511 CDS
T03196
Name
(RefSeq) F-box protein SKP2A
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103336511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103336511
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
103336511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
LRR_At5g56370
F-box-like
LRR_Zer-1
F-box
LRR_8
RsmF_methylt_CI
Motif
Other DBs
NCBI-GeneID:
103336511
NCBI-ProteinID:
XP_008237775
UniProt:
A0ABM0PCU6
LinkDB
All DBs
Position
LG6:complement(20676010..20679856)
Genome browser
AA seq
379 aa
AA seq
DB search
MVGKENFKTEDLNLCFEKLMMFGGGSAGAIALGCGKVKMEGRAITDWKDIPMELLLQILG
IVDDQTVIMASGVCRGWRDAVCLGLTRLSLSWCTKNMNNLVLSLAPKFTRLQTLILRQDK
PQLEDNAVESIANFCHDLQVLDLSKSFKLSDRSLYALAHGCPNLTKLNISGCTAFSDSAL
EYLASFCQKLKVLNLCGCVRTALDRALLAIGRYCSQLQCLNLGWCEDVSDVGVMSLAYGC
PDLRTVDLCGCLQITDDSVIALANRCPHLRSLGLYYCQNITDRAMYSLAQSLVRNKPAAV
WESRKPKNDEEGLRTLNISQCTALTPSAVQAVCDSFPALHTCSGRHSLIMSGCLNLTSVH
CACAVQAHRTASAFPHSAH
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggtaggaaaagaaaacttcaagactgaagacttgaacttgtgctttgagaaactcatg
atgtttggtggtggtagtgctggtgctattgctcttggttgtggaaaagtgaaaatggaa
ggaagggctattactgattggaaggatattcccatggagctcctgttgcaaatccttgga
attgtcgatgatcagacggtgatcatggcttctggagtctgtcgtggctggagagatgct
gtttgcttaggccttacccgtctctccctttcatggtgcaccaagaacatgaacaacttg
gtcctatctcttgctcctaagtttacaagattgcagactctaattctacgtcaagataaa
ccccaacttgaggataatgctgttgagagcattgcaaacttctgtcatgatctgcaggtc
ctggacctcagcaaaagcttcaagctcagtgaccgctccctgtatgccttagctcatggg
tgccctaatcttacaaaactcaacattagcgggtgtacggccttcagtgacagtgctctt
gagtatctggctagcttttgccaaaaattgaaagttctgaatctttgtggatgtgtcaga
actgcgttagacagggcattgctggctattggtcgttattgcagtcagttgcagtgtctg
aatcttggttggtgtgaggatgtaagtgatgttggagttatgagcttggcatatggatgc
cctgatctcagaaccgttgatttgtgtggctgtctccaaataacagatgacagtgtgatt
gctttggcaaacaggtgccctcatctgagatcccttggcctctattactgtcagaacatt
acagacagagcaatgtattctttggcccagagtttagttaggaacaagcctgcagcagtg
tgggaatctaggaaacccaagaatgatgaggaagggctcaggactcttaacatcagccaa
tgcacagcactaaccccttctgctgttcaggcggtgtgcgactcatttcccgcacttcat
acctgctctggaaggcattccctcattatgagcggctgtttgaacttgacatccgtgcat
tgtgcctgtgctgtccaagcacaccgcacggctagcgcctttcctcattcagctcattga
DBGET
integrated database retrieval system