KEGG   Prunus mume (Japanese apricot): 103336511
Entry
103336511         CDS       T03196                                 
Name
(RefSeq) F-box protein SKP2A
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
pmum  Prunus mume (Japanese apricot)
Pathway
pmum04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103336511
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmum04121]
    103336511
Ubiquitin system [BR:pmum04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     103336511
SSDB
Motif
Pfam: DUF7885 LRR_6 LRR_4 LRR_At5g56370 F-box-like LRR_Zer-1 F-box LRR_8 RsmF_methylt_CI
Other DBs
NCBI-GeneID: 103336511
NCBI-ProteinID: XP_008237775
UniProt: A0ABM0PCU6
LinkDB
Position
LG6:complement(20676010..20679856)
AA seq 379 aa
MVGKENFKTEDLNLCFEKLMMFGGGSAGAIALGCGKVKMEGRAITDWKDIPMELLLQILG
IVDDQTVIMASGVCRGWRDAVCLGLTRLSLSWCTKNMNNLVLSLAPKFTRLQTLILRQDK
PQLEDNAVESIANFCHDLQVLDLSKSFKLSDRSLYALAHGCPNLTKLNISGCTAFSDSAL
EYLASFCQKLKVLNLCGCVRTALDRALLAIGRYCSQLQCLNLGWCEDVSDVGVMSLAYGC
PDLRTVDLCGCLQITDDSVIALANRCPHLRSLGLYYCQNITDRAMYSLAQSLVRNKPAAV
WESRKPKNDEEGLRTLNISQCTALTPSAVQAVCDSFPALHTCSGRHSLIMSGCLNLTSVH
CACAVQAHRTASAFPHSAH
NT seq 1140 nt   +upstreamnt  +downstreamnt
atggtaggaaaagaaaacttcaagactgaagacttgaacttgtgctttgagaaactcatg
atgtttggtggtggtagtgctggtgctattgctcttggttgtggaaaagtgaaaatggaa
ggaagggctattactgattggaaggatattcccatggagctcctgttgcaaatccttgga
attgtcgatgatcagacggtgatcatggcttctggagtctgtcgtggctggagagatgct
gtttgcttaggccttacccgtctctccctttcatggtgcaccaagaacatgaacaacttg
gtcctatctcttgctcctaagtttacaagattgcagactctaattctacgtcaagataaa
ccccaacttgaggataatgctgttgagagcattgcaaacttctgtcatgatctgcaggtc
ctggacctcagcaaaagcttcaagctcagtgaccgctccctgtatgccttagctcatggg
tgccctaatcttacaaaactcaacattagcgggtgtacggccttcagtgacagtgctctt
gagtatctggctagcttttgccaaaaattgaaagttctgaatctttgtggatgtgtcaga
actgcgttagacagggcattgctggctattggtcgttattgcagtcagttgcagtgtctg
aatcttggttggtgtgaggatgtaagtgatgttggagttatgagcttggcatatggatgc
cctgatctcagaaccgttgatttgtgtggctgtctccaaataacagatgacagtgtgatt
gctttggcaaacaggtgccctcatctgagatcccttggcctctattactgtcagaacatt
acagacagagcaatgtattctttggcccagagtttagttaggaacaagcctgcagcagtg
tgggaatctaggaaacccaagaatgatgaggaagggctcaggactcttaacatcagccaa
tgcacagcactaaccccttctgctgttcaggcggtgtgcgactcatttcccgcacttcat
acctgctctggaaggcattccctcattatgagcggctgtttgaacttgacatccgtgcat
tgtgcctgtgctgtccaagcacaccgcacggctagcgcctttcctcattcagctcattga

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