Prunus mume (Japanese apricot): 103336540
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Entry
103336540 CDS
T03196
Name
(RefSeq) vacuolar protein sorting-associated protein 9A-like isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103336540
Membrane trafficking [BR:
pmum04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
103336540
Protein recycling
Other Rab GTPase associated proteins
103336540
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
XRN_M
Motif
Other DBs
NCBI-GeneID:
103336540
NCBI-ProteinID:
XP_008237814
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All DBs
Position
LG6:complement(20843655..20847925)
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AA seq
378 aa
AA seq
DB search
MEGSSSSSAIFYDFLDRMRNPASLDLVRSIKSFIVSFSFYAANPENDGKKVQEFYTTMED
TIRDHPLWAGATDQEVDCAMEGLEKYVMTKLFSRTFSSTPEDVKIDLETSQKIHLLQTFL
KPEHLDIPTVLRNEASWLLAEKELQKINAFKAPREKLLCVMNCCKVINNLLLNASMSENH
VLAGADDFLPVLIYVMIKANPPQLHSNLKFIQLYRRQTKLVSEAAYYLTNLVSAKTFIFE
LNAKSLSIDEIEFEESMQAARTTNKETEKEATPTLEERTTSQGQTDPGPSARSHDKETSG
ASNYPYMDKEAGDLTIGDVERLLSVYKQVVTKYTGLCTAVKHLSLSRTEPHVTNLEARNV
FLTQPEKTGKNSDQRVGQ
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggagggatcttcatcctcttcggctatcttctatgattttctcgatcgaatgcgaaac
cctgcttccctcgatctcgtccgatccatcaaaagctttattgtctcattttcgttttac
gcggccaaccctgaaaatgacggcaaaaaggttcaagaattctacacaacaatggaagac
actattagggatcatccattgtgggcaggtgccactgatcaggaggttgattgtgcaatg
gagggtttggagaaatatgtcatgacaaaattgttctcccggaccttttcttctactccc
gaggatgtaaagattgaccttgaaacctcgcagaaaatacacttgttgcagaccttcttg
aagcctgagcatttggatattccaacagttctacgcaatgaagcttcatggctgcttgca
gaaaaagaattgcagaaaattaatgctttcaaagcccctcgtgagaagcttctgtgtgtt
atgaactgttgcaaggtcatcaacaatttattgttgaatgcatcaatgtcagaaaatcat
gtactggcaggagctgatgactttcttcctgtccttatatatgttatgatcaaggccaat
cctccacaattgcattccaacctcaaattcattcagttatatcgaaggcagacaaaactt
gtgtctgaagcggcctattacctcaccaatcttgtctcagccaaaacatttatttttgag
ttaaatgctaaatctctttctatcgatgaaatcgaatttgaagagagcatgcaagcggca
agaacgaccaataaagagacagaaaaggaagccacgcccactttggaagaaaggacaacc
tcgcaaggccagaccgatcctggcccttcagcaagatcacatgataaagaaacaagtggt
gcgtcaaattacccttatatggacaaagaggctggggatttgacaattggagatgtggag
aggttgctgagcgtgtacaaacaagttgttaccaagtatactggtctgtgcacagccgtt
aaacacctttctctttctaggacagaaccccatgtcactaatttagaagctagaaatgtt
ttcttaacacagcccgagaaaacaggtaagaattctgatcaaagagtagggcaatga
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