Prunus mume (Japanese apricot): 103336607
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Entry
103336607 CDS
T03196
Name
(RefSeq) LOW QUALITY PROTEIN: chlorophyll a-b binding protein of LHCII type 1
KO
K14172
light-harvesting complex II chlorophyll a/b binding protein 7
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00196
Photosynthesis - antenna proteins
pmum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
103336607
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
pmum00194
]
103336607
Photosynthesis proteins [BR:
pmum00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
103336607
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Chloroa_b-bind
Motif
Other DBs
NCBI-GeneID:
103336607
NCBI-ProteinID:
XP_008237889
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Position
LG7:complement(142372..147386)
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AA seq
327 aa
AA seq
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MALLQPRASPCSVSSFIHHPHSLALKSPTNLTFTKPRSSVCKASWQELVGVLVFSAIPFT
AVKAIANSAVGESLQRRLEERKKVAVENSSRFRGLAEKARKQRXFSGKXXXXWLGPIPYD
YPAYLTGELPGDYGFDVVGLSRDPVAFQKYFNFEILHARWAMLAALGALIPEILDLLGAF
HFVEPVWWRVGYSKLKGDTLDYLGIPGLHVAGSQGVIVIAICQALLMVGPEYARYCGIEA
LEPLGIYLPGDVNYPGGELFDPLNLSRDPVAFEELKVKEIKNGRLAMVAWLGFYSQAALT
GKGPVQNLLEHISDPLHNNVLSVLKFM
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcttcagccacgagcttcgccttgttcagtttcctcattcattcatcatcct
cactctctggctctaaaatcccccaccaacctcacatttactaagcctcgttcttctgtt
tgcaaagcttcatggcaagagcttgtgggagttctggtgttctcggctattccattcacg
gctgtgaaagccatagccaacagcgcagtcggagagtcgctgcagaggcgattggaggaa
aggaagaaagttgcagttgagaattcttccaggtttaggggcttggccgaaaaggctcga
aaacagaggtaattttcgggtaagnnnnnnnnnnnctggcttggtccaattccttatgat
tatcctgcatatctgactggagaactacctggggattatggttttgatgttgtaggtctg
agcagggatcctgtggctttccaaaaatattttaacttcgaaatactccatgctcgttgg
gccatgctagcagcccttggtgccttgattcctgaaattttggacctcttaggagccttt
cactttgttgaacctgtatggtggcgagttggctattcaaaacttaagggagatacactg
gactacctaggcatcccgggactgcatgtagctggaagccaaggagtgattgttatagcc
atatgccaagccctcctgatggttggaccagaatatgcaagatattgtgggattgaagca
ttagagccgttgggaatttaccttccaggtgatgttaattacccaggaggagagcttttt
gatcccttgaacctctcccgagaccctgtagcttttgaagagctgaaggtgaaagagatc
aaaaatgggcggctagcgatggtagcctggttaggcttctacagtcaagcagcattgaca
ggtaaaggtcctgtacagaacctacttgaacacatttctgatcccctacacaacaacgtg
ctttcagtactcaaatttatgtaa
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