Prunus mume (Japanese apricot): 103336844
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Entry
103336844 CDS
T03196
Name
(RefSeq) homeobox-leucine zipper protein HDG5 isoform X1
KO
K09338
homeobox-leucine zipper protein
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmum03000
]
103336844
Transcription factors [BR:
pmum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
103336844
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Cupin_8
MRP-L20
Motif
Other DBs
NCBI-GeneID:
103336844
NCBI-ProteinID:
XP_008238183
UniProt:
A0ABM0PDT9
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Position
LG7:2754498..2760468
Genome browser
AA seq
837 aa
AA seq
DB search
MLEAKMYGDCQVMSTMGGGNVVTSETLFSSPIQNPNFNFMPSQLPFQPFSSIINPKEENG
LLMRGKEEMMESGSGSEQVEEKSGNEQEADQLQQPPKKKRYHRHTAHQIQEMENLFKECP
HPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQDRSDNVMLRAENDSLKNENYRLQT
ALRNIICPNCGGPSMIADIGLDEQQLRLENARLREELERVCCLSSRYTTERQIQTMAPGD
PLMSASSLDLDMNIYSRHFQDPMTSCGDMIPMPLLPPEVPSHYNEGGVLLDEEKTLAVEL
AASSVDELVKMCHAGEPLWIRNSEIGKEVLNVKEYTRMFPPWPLNLKHHSSDQFRTEATR
DSAVVIMNSINLVDCFLDANKWMELFPSIVSRAKTVQVIQADPSGQANGSLQLMYAELQV
LSPLVPTREAHFLRYCQQNAEEGCWAIVDFPIDSFHDNLQSSFPRYKRLPSGCLIQDMPN
GYSKITWVEHAEIEEKPVHQILSHYVYSGMAFGAQRWLAILQRQCERVASLMARNISDLG
VIPSPEARKNLMKLSQRMIRTFCVNMSTSNGQSWTALSDSPDDTVRITTRKVTDPGQPIG
VILSAVSTTWLPYSHFRVFELLRDEHRRAQQLDVLSNGNSLHEVAHIANGSHPGNCISLL
RINVASNSAQNVELMLQESCTDESGSLVVYTTMDVDGIQLAMSGEDPSCIPLLPLGFVIV
PLHPMESTCPTPNHLTSSSPDHRQEDSTATTTTTSNVINSGCLLTVGLQVLASTSPSAKL
NLSSVTAINNHLCNSVQQIISALSSSSDTCIAAATTENGSVGGGASCSDPTASSPRQ
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgctggaagcgaaaatgtatggggattgccaagtaatgtcaaccatgggaggtgggaac
gtagtcacctcggaaaccctcttttcgtcgccgatccaaaaccctaacttcaacttcatg
ccttcccagctccctttccaacctttctcttccatcatcaatcctaaagaagaaaacggg
ctgcttatgagaggcaaggaggagatgatggagagtggttctggaagtgagcaagttgaa
gaaaaatctggaaacgagcaagaggctgatcaacttcaacaacctcctaagaagaaacgc
tatcatcgccacactgctcatcagatccaagaaatggagaatttgtttaaggagtgtcct
cacccagacgacaagcagaggctaaaactgagccaggagctgggactgaagccacgccag
gtcaagttctggttccaaaaccgacgaactcaaatgaaggcacaacaagaccggtcggat
aatgtgatgcttagagcagaaaatgatagcctgaagaacgagaattaccggctacagacg
gcgctgcgcaatattatatgccctaattgtggcggaccatctatgattgcggacattggc
ttggatgaacaacaacttcgacttgagaatgctcgactcagagaagagttggaacgagtt
tgttgtctgagttcacgatatactactgaacggcaaatccaaacaatggcacctggagat
cctctcatgtcagcatccagcttggatttggatatgaacatctattcaaggcatttccaa
gacccaatgacttcttgtggggacatgatccccatgcctttgttgccaccagaagttcct
tcccactacaatgagggtggtgtattgttagatgaagaaaaaactcttgcagtggagctt
gccgcttcatcggtggatgaacttgttaagatgtgccatgctggtgagcctctttggatc
cggaacagtgaaattgggaaggaagtgcttaatgttaaagaatatacccggatgttccca
ccgtggcctttgaacctcaagcaccactcaagtgatcagtttaggacagaagctactcgt
gatagtgctgtggttatcatgaatagcatcaatcttgtagattgcttccttgatgctaat
aagtggatggagctgtttccttctattgtttctagagccaaaactgttcaagttattcaa
gcagacccctctggtcaagcaaatggttctcttcagctgatgtatgccgaattgcaagtt
ctttctcctctggtgccaactagagaagcacattttctccgttattgtcaacaaaatgcg
gaggagggatgttgggcaattgtagattttcccatagatagcttccatgacaacctccag
tcgtcgtttccccgatacaagagattgccctccggctgccttatccaagacatgcccaat
ggatactcaaaaattacatgggtagaacatgcagagatagaggagaagcctgtccaccaa
atattgagccactatgtctacagtgggatggctttcggggcgcaacgctggcttgcaatc
ttacaaaggcagtgtgaaagggttgcaagtctcatggccagaaatatatcagaccttgga
gtgataccttccccagaagcacgaaagaatttgatgaaactgtcacagagaatgataaga
acattttgtgtaaacatgagcacctccaatgggcagtcatggacggctctatctgattcc
ccagacgatactgtcagaataaccacaaggaaggtcacagaccctggtcaacccattggt
gttattctcagtgctgtgtccaccacctggctcccatattctcacttccgtgtcttcgaa
ctcctacgggacgaacatcgcagagctcagcagcttgatgttctttccaatgggaattcc
ttgcacgaagtggctcacattgccaatggctctcatcctggcaattgcatttctcttctt
cgcataaacgtagcgagcaactcagcacagaacgtagagctaatgctacaagagagctgc
accgacgagtcgggcagccttgtggtgtacacaaccatggacgtggacggcatccaattg
gcaatgagtggagaggacccttcctgcattcccctccttcctctcggctttgtcattgtc
ccactgcaccctatggaatctacctgcccaacacccaatcacctcacctcatcatcgcca
gatcatcgtcaagaagacagcactgccaccaccaccacgaccagcaatgttataaactca
ggttgtctgctgactgtgggactccaagtccttgccagcacaagtccttccgcaaaactc
aacctctccagcgtcaccgccattaacaaccatctctgcaactcggtgcagcagattatc
tccgctctcagtagcagcagcgacacgtgcattgccgctgctacaactgagaatggcagc
gttggtggcggggcctcttgctccgacccaactgcttccagccccaggcaatag
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