Prunus mume (Japanese apricot): 103336892
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Entry
103336892 CDS
T03196
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmum01002
]
103336892
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103336892
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103336892
Peptidases and inhibitors [BR:
pmum01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103336892
Ubiquitin system [BR:
pmum04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103336892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
103336892
NCBI-ProteinID:
XP_008238245
UniProt:
A0ABM0PDY9
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All DBs
Position
LG7:complement(3394042..3398169)
Genome browser
AA seq
722 aa
AA seq
DB search
MPALAETLDGSSPFSQKEAVDDHALVSIAENANGSSPSSPLKALDDMSSDSSLPNPTGSS
PSVEEGQEDEPSPPSPLKIVGNDLSNYESDPHSEFSGPSRWSSSAPSWSSRWSSNSTKES
VISSDSQFSICETKPSMVGAGLANLGNTCFMNAILQCFTHTVPLVEGLRSCNHSMPCDRG
SEGFCVLCALHDHVDLSVASSGRVISPWKLVNNLNHFSSFFQRYQQEDAHEFLQCFLDKL
EKSCLDSLEKESLSAQDQNLVERVFGGRLLSKLRCCNCGHCSDTYEPLIDLSLEIEDAVT
LPRALESFTKIETINDLETKFTCENCKEEVSVEKQLVVDQAPLVAAFHLKRFKTDGSHVE
KIEKHVEFPLELDLKPYTSGSDNNVELKYELYAIVEHVGFSSTSGHYFCFIRSSPDTWHR
LDDSKVTRVQEEFVLSQEAYILFYARQGTPWFSSIVESLKPCLDPAMTNTSPKSVLENVE
SVSILSPSVNNVDCCVANEPGDAHERITLSLPRARCEEVEVIDTRDAADGCSKETKDSAA
VIDASTPGRASNSFDGKSHNNENICSTSSLGGNRCHKRSPKVYLHPMTPPRSPSPDLPSF
ESPEPIYCLPRDHSKSVDSVACKRSLNNIVRSDHLKSADNALCKRPSNNDVDDSKRIEAF
RYLSKKSLTRDRGSQLLAAMVRPQSEGSSNKRRKRVGSSPCKKVSPPGGSHKSMRPVAAA
LR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctcttgcagaaaccctagatgggtcttcgccattttcgcaaaaggaagccgta
gatgaccatgctttggtgtctatcgcagaaaatgcaaatgggtcgtcgccatcttcacct
ctcaaagccctagacgatatgtcttcggattcttctttgccaaacccaactgggtcttca
ccatctgttgaagaaggccaagaagatgaaccatcaccaccttcgcctctcaaaattgtt
ggtaacgatttatcaaattatgaatctgatccacattcggagttctcaggaccatcgcgg
tggtcgtcttccgcaccttcttggtcttctcggtggtcgtcgaattctaccaaggaatca
gtgatttcctcggattcccagttttcaatatgtgaaacaaagccctctatggtgggtgca
gggcttgcaaatctaggcaacacatgctttatgaatgcaattctgcaatgcttcacgcac
actgtgccactcgtggagggtcttcgttcttgcaatcattccatgccctgtgatcgtggt
agtgaaggattctgcgttctttgtgctcttcacgaccatgttgatctttcagtagcttct
tcaggaagagttatttcaccatggaaacttgtcaacaatttgaatcatttctcatctttc
ttccaaagataccagcaagaagatgcccatgagttcttgcaatgcttcttagacaaactt
gagaaatcttgtttggattcgttggaaaaggagagtctatctgcccaagatcaaaacctt
gtggaaagggtttttggtggtcgtctcctaagcaaacttcgttgttgcaattgcggtcac
tgttctgacacttacgaacctctgattgatctgagtttggagattgaagatgcagtgact
ctcccaagggccctggagtccttcactaagatagaaactatcaatgacttggagacaaag
tttacatgtgagaactgcaaggaagaagtgtcagtggagaagcagcttgtggtggaccag
gctcctctagttgctgcatttcatctgaagagatttaagactgatggatctcatgttgag
aagattgaaaaacatgtagaatttcctttggagttggacttgaagccctacaccagtgga
agtgacaataatgtggaattgaagtatgaactttatgcaattgtggagcatgttgggttc
tcatctacttctggacattacttttgcttcattcggtcatctccagatacatggcatagg
ttggatgactcaaaggtcactagggttcaagaagagtttgttctgtcacaggaggcctac
attctgttctatgcaaggcagggtactccttggttttctagcatagtggaatcactaaag
ccgtgcttggatccagctatgacgaatacatcacccaaatcggtcctagagaatgtcgag
agtgtcagcattttatctcctagtgtaaacaatgttgattgttgtgttgccaatgaaccc
ggagatgctcatgagagaattactctttcgttgcctcgagcaagatgtgaagaggttgag
gtcattgacactagagatgcagccgatggttgttccaaggagactaaagatagtgctgct
gtgattgatgcttcaactccagggagggcaagtaactcctttgatggaaaatcacacaac
aatgagaatatatgtagtacatcgtctcttggtggaaataggtgccataaaaggtctcct
aaagtttatctccatcctatgacaccacccagatctcctagtcctgatctgccttctttt
gagtctccagaaccaatttattgtcttccacgcgatcattcgaagtcagtggacagtgtt
gcctgcaaaagatcattgaacaatattgttcgaagtgatcatttgaagtcagcagacaat
gcgctctgtaaaagaccttccaacaatgatgtggatgattcaaagagaattgaagctttc
agatatctttcaaaaaagagtttgacaagggacaggggaagccaacttcttgctgccatg
gtcaggcctcaaagtgaaggttcttcgaacaagagaaggaagagagtgggatcatcacca
tgcaaaaaggtcagccctcctggtggtagtcataaatctatgcgtcctgtggcggcggca
ttacggtga
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