Prunus mume (Japanese apricot): 103336929
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Entry
103336929 CDS
T03196
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic-like
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103336929
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmum01007
]
103336929
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmum03016
]
103336929
Enzymes [BR:
pmum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
103336929
Amino acid related enzymes [BR:
pmum01007
]
Aminoacyl-tRNA synthetase
Class II (U)
103336929
Transfer RNA biogenesis [BR:
pmum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
103336929
Prokaryotic type
103336929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
tRNA-synt_2d
EAD7
Nuclease_act
Motif
Other DBs
NCBI-GeneID:
103336929
NCBI-ProteinID:
XP_008238291
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Position
LG7:complement(3827154..3832237)
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AA seq
589 aa
AA seq
DB search
MPTVSVGRDRLFAALGRAYTQEEFEEVCFSFGIELDDVTTEKAIIRKEKHLDDDAVDEDE
EVIYKIEVPANRYDLLCLEGLAQALRVFSREEEVPTYKLANISKESMIKMHVKPETSSIR
PHVVCAVLRGVTFTEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQAPFTYEALPP
SSINFVPLKQAKNFRADELMEFYRSDLKLKKFLHIIENSPVFPVLYDNNRTVLSLPPIIN
GAHSAITLKTKNVFIECTATDLTKAKIVLNTIVTAFSAYCERKFEIEPVEVVYSDGKSYI
YPDLSIYNMDVSLSYVNGTIGVSLEAEEVTDLLNRMQLRAEQSVSGDITVFVPPTRSDIL
HPCDVMEDVAIAYGYNNIPKRKPASLKPLALNELTDRIKLEIAMDGFTEVLTFILGSWRE
NFAMLNRKDDKSKAVIVGNPRSSDFELVRTSLMPGVLKTVGHNKDHPKPIKIFEVGDIAL
LDEKKDVGATNRRQLAALFCGASSGFELIHGLVDRVMEAIGAAFVPIGDNSGYFIKPSDE
PEFLPRRQASIIYKGKNIGTFGIVHPEVLNNFDIPDPCSFVELNIESLL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccgtcagcgtgggacgggatcgtctgtttgcagcattaggaagagcttacact
caggaagagtttgaagaagtatgcttcagtttcggcatcgagctggacgacgttacaact
gagaaagcaattattagaaaagaaaagcatttggacgatgatgcagttgacgaagatgaa
gaagttatttacaaaatcgaagttcccgcaaatagatacgatttactttgccttgaaggg
ctggctcaagcgctccgtgttttcagtagggaagaggaggttcctacatacaagttggcc
aacattagtaaggagtccatgattaaaatgcatgtaaaaccggagacatcttcgattcgc
cctcatgttgtctgtgctgttttaagaggggttaccttcactgaagcaagttataacagc
ttcattgatctccaagacaagcttcatcaaaatatctgccggcgaagaacactagttgcc
attgggactcatgacttggatacattgcaagcccctttcacatatgaggctttgccacct
tcaagtataaattttgtgcctctgaaacaggcgaagaacttcagagctgatgagctcatg
gaattttacagatcggatctgaaactgaagaagtttttgcacataatagagaactcaccg
gtgtttcctgttttatatgataataacagaactgttttatctttaccccccattattaat
ggtgcacattcagcaatcactttgaagacaaagaatgttttcatagaatgtacagctact
gatctgacaaaggccaagattgttctgaacacaatagtgacagcgttttcagcatattgt
gaaagaaagtttgagattgaacctgttgaagtggtatattctgatggaaagtcatatatc
tatcctgatttatcaatctacaacatggatgtttctctatcatatgttaatggtacaatt
ggagtctctttggaagcggaagaggttactgacttgttgaatcgaatgcaattgcgtgct
gagcagtctgtatcaggcgatatcactgtatttgtacctcccactagaagtgacattctt
catccttgtgatgttatggaggatgttgcaattgcttatggatataataatatcccaaag
agaaagcctgcatctttgaagccactagccttgaatgagctcactgaccgcataaaattg
gagattgcaatggatgggttcacagaggtcttgacatttatattgggctcatggagagaa
aattttgccatgttaaatcgtaaagatgataaatcgaaggcagtgattgttggaaatcct
cgatcgtctgattttgaacttgttcgaaccagtctgatgcctggtgtattaaaaactgtt
ggtcacaacaaagatcatccaaagcccataaagattttcgaagtgggtgatatagcacta
ttggatgagaagaaagatgttggtgcgacaaatcgacgccaactagcagctcttttctgt
ggtgctagctctggatttgagttgattcatggcttggtggacagagttatggaagcgatt
ggtgctgcttttgttccaattggtgacaacagtgggtacttcataaaaccttcagatgaa
cccgagtttcttccgcgtagacaagcaagcatcatttataaagggaagaacattggaaca
tttggcattgtgcaccctgaggtgttaaacaacttcgacattcctgatccgtgctccttt
gtagaacttaacattgagagtttgttgtag
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