Prunus mume (Japanese apricot): 103337041
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Entry
103337041 CDS
T03196
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31-like isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103337041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmum03041
]
103337041
Spliceosome [BR:
pmum03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
103337041
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
103337041
NCBI-ProteinID:
XP_008238410
UniProt:
A0ABM0PEC6
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Position
LG7:complement(4538128..4542354)
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AA seq
485 aa
AA seq
DB search
MATLADSFLADLDELSDNEADVIVEDDADAENMEEDVDGDLADLETLNYDDLDSVSKLQK
TQRYADIIQKVEEALVKGSDMSSHGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRD
KYRPKFPELESLVHHPIDYARVVKKIGNEMDVTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEEVLTKTNEACDRALALDSAKKKVLDFVESRMGFIAPNLSAIVGSAVAAKLMGTAGGL
TSLAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYVEQTEIFQTTPPSLRMRACRLLAAK
STLAARVDSTRGDPSGNTGRAFREEIRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSMGQSKLAA
KVAKKFKEKNYGSSGATSGLTSSLAFTPVQGIELSNPQAYAHQLGGGTQSTYFSETGTFS
KIKRI
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcttgctgattcatttcttgcagaccttgatgaactatctgacaatgaagct
gatgttattgttgaagatgatgctgatgctgaaaacatggaagaagatgttgatggggac
ttggcagacttggaaacgcttaattacgatgatctggatagtgtttcaaaattacagaaa
acacaaagatatgctgatataattcagaaagtggaagaggcactggtgaagggttctgat
atgtcaagtcatggaatagttttagaagatgatccagaataccagctgattgtggactgt
aatgctttgtcagttgacattgagaatgaaattgtaatcatccacaattttattcgtgat
aagtatcgcccaaagtttccagagcttgaatcacttgtgcatcatccaattgattatgcc
cgagttgttaagaaaattgggaatgaaatggatgtaaccctcgttgatctggaggggctt
ttaccttccgcaattattatggttgtgtcagttacagcatcaactacaagtggcaaaccg
cttccagaggaagtccttacaaaaacaaatgaggcatgcgatcgagcccttgcgcttgat
tcagcaaagaagaaggttcttgatttcgttgaaagtagaatgggttttattgcaccaaac
ctttctgctatagttgggagtgctgttgcggcgaaacttatggggacagccggcggtctc
acatccttagctaagatgcctgcttgtaatgttcagcttcttggtgctaagagaaaaaac
cttgctgggttttccactgcaacatcacaatttcgtgttggttatgttgaacagacagaa
atatttcaaactacacccccttctttgaggatgcgtgcctgccggctcttggctgcaaaa
tcaacacttgcagcacgggtggattccacaagaggagatccatctggaaacactggaagg
gcattccgggaggagattcgtaagaaaattgagaaatggcaggagcctcctcctgcaaaa
caacctaaaccacttccggttcctgattctgaacctaaaaagaagaggggtggtcgccgg
ttaaggaagatgaaggaaagatatgcgataacggacatgaggaagctggcaaataggatg
caattcggtatacctgaagagagttccttaggggatggactgggtgaaggttatggaatg
cttggtcaagctgggagtggcaagctgcgtgtatcaatgggtcagagcaaacttgctgcc
aaagtcgctaagaagttcaaggaaaagaattatggaagcagtggtgctacatctggactt
acttcaagtttagcatttacgcctgtgcaggggatcgagctctcgaatccacaggcttat
gcacaccagctcggcggtggaactcaaagcacctacttctctgaaacgggaacattttca
aaaatcaagaggatctga
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