Prunus mume (Japanese apricot): 103337071
Help
Entry
103337071 CDS
T03196
Name
(RefSeq) DNA mismatch repair protein MSH4
KO
K08740
DNA mismatch repair protein MSH4
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmum03036
]
103337071
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Meiosis-specific proteins
Others
103337071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_29
AAA_23
TR61B_FKBP-like
Motif
Other DBs
NCBI-GeneID:
103337071
NCBI-ProteinID:
XP_008238446
LinkDB
All DBs
Position
LG7:4943784..4952812
Genome browser
AA seq
792 aa
AA seq
DB search
MEDDAGERSSFVIGLIENRAKEVGVAAFDLRLASLHLSQYIETSSSYQNTKTLLQFYDPM
VIIVSPNKLAPDGMVGVSELADRFYATVKKVVMARGCFDDTKGAVLIKNLAAKEPSALGL
DTSYKQYYLCLAAAAATIKWIEAEKGIIITNHSLLVTFNGSFAHMNIDATSVQNLEIIEP
LHSTLWGTSNKKRSLLNMLKTTKTVGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ
LFFGLAQVLSKFPKESDRVLCHFCFKPRKITNKVMGVDYARKSQVLVSSIILLKTALDAL
PLLSKVLKDAKCFLLANVYKSVCENEKYAAIRRRIGEVIDEDVLHARVPFVARTQQCFAV
KAGIDGLLDIARRSFCDTSEAIHNLANKYREDFKLPNLKIPFNNRKGFYFSIPHKDIQGK
LPSQFIQVLKHGNNLHCSTLELASLNVRNKSAAAECYIRTEVCLEELVDAIREDVSALTL
LAEVLCLLDMIINSFAHAISTKPVDRYTRPEFTDNGPMAIDAGRHPILETIHNDFVPNNI
FLSQASNMVLIIGPNMSGKSTYLQQVCLIVILAQIGCYVPARFSTLRVVDRIFTRMGTVD
NLESNSSTFMTEMKETAFIMQNVSQRSLIVMDELGRATSSSDGFAIAWSCCEHLLSLKAY
TIFATHMENLSELVTVYPNVKILHFDVDIKNNRLDFKFQLKDGARHVPHYGLLLAEVAGL
PSSVIETARNITSRITEKEVRRMEVNCLQYQPIQMAYHVAQRLICLKYSSQDEDSIREAL
HNLKDSYIHGRL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacgcaggagagagatcgagcttcgttatcggcctcatcgagaacagagct
aaggaggtgggagttgcagcctttgatttaaggttggcttctctccatctttctcaatat
attgaaactagcagctcatatcagaatacaaaaactttgctgcaattctatgatcctatg
gtgattattgtttcaccaaacaagctggcacctgatggaatggttggagtttcagaattg
gctgacagattttatgctacagtcaagaaggttgtaatggcccgtggttgctttgatgac
actaagggtgctgtgctgattaaaaatctagcagcaaaggaaccttctgcactaggattg
gatacctcttacaagcagtattacctctgcttggctgcagcagcagctacaattaagtgg
atagaagcagagaaagggatcatcattacaaaccactcacttttggtcacttttaatgga
tcatttgcccatatgaatattgacgctaccagtgttcaaaatttggaaatcattgagcca
cttcattcgacactttggggaacaagcaacaagaaaagaagtttattgaacatgctcaag
acaacaaaaactgttggagggtctagacttcttcgtgccaatctattgcagcctttaaaa
gatattgaaactataaatgcccgtcttgattgcctggatgagctcatgagcaatgaacag
ctgttctttggactcgctcaggttttgagtaaatttcccaaagagagtgatagggtactt
tgtcacttctgcttcaagccaaggaaaataacaaacaaagtcatgggtgttgattatgct
agaaaaagccaggtcttggtttcaagcattattctcctcaaaactgctctagatgccttg
cccttactctcgaaggttcttaaagatgcaaagtgttttcttcttgcaaatgtttacaag
tctgtatgtgaaaatgagaagtatgctgccattagaaggaggattggagaggtgattgat
gaagatgtgcttcatgcacgggttccttttgtagcccgcacacagcagtgttttgctgtc
aaggctggaattgatggacttttggatattgcgcggagatcattttgtgatactagtgaa
gctatacataatcttgctaacaagtatcgtgaagatttcaagttgcccaatttgaaaatc
ccatttaacaataggaaagggttctactttagcattccacataaggacattcaagggaag
cttcctagtcagttcattcaggtattgaaacatggtaacaatttacactgctcaaccttg
gagcttgcttctctaaacgttagaaataagtctgcagctgcagaatgctacatacggaca
gaagtttgcctggaagaattagtagatgccatacgtgaggatgtttctgcactcacactg
cttgcagaggtcttatgccttttggatatgatcattaattcatttgcacatgccatttcc
acaaagccagttgatcgttacaccagaccagaatttacagataatggtcccatggcaatt
gatgctggaagacaccctatcctagagaccatacacaatgacttcgtccccaacaatata
tttttatcacaggcgtcaaacatggtgcttatcataggcccaaacatgagtggaaagagt
acttaccttcaacaagtgtgtcttatagttattcttgctcagatcggttgttatgttcct
gctcgcttctcaactctaagggttgttgatcgtatatttacaaggatgggtacagtagat
aatcttgaatccaactctagtacgttcatgacagaaatgaaagaaacagcttttatcatg
caaaatgtctcccagaggagtctgattgttatggatgaacttgggagggctacatcttct
tctgatggatttgcaattgcttggagctgctgcgaacatttgttatcactgaaagcgtat
actatatttgctactcatatggaaaacctatcagaactagtaaccgtctatccaaatgtg
aaaatacttcactttgatgttgacattaaaaataaccgtctagatttcaagtttcaactg
aaggacggagcgagacatgttccgcactatggccttctattagcagaagtggcaggactg
ccaagctcagtaattgaaacagccagaaacatcacatccaggatcacagaaaaggaagtg
aggaggatggaagtaaactgccttcaataccaaccgatccagatggcgtaccatgtcgct
cagcggctgatatgtttgaagtactccagccaggatgaggattcaatcagagaagcactg
cataatttgaaagacagctacattcatggaaggctgtag
DBGET
integrated database retrieval system
