Prunus mume (Japanese apricot): 103337159
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Entry
103337159 CDS
T03196
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103337159
Membrane trafficking [BR:
pmum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
103337159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
103337159
NCBI-ProteinID:
XP_008238533
UniProt:
A0ABM0PEN4
LinkDB
All DBs
Position
LG7:complement(5461684..5470083)
Genome browser
AA seq
1418 aa
AA seq
DB search
MASNPPFQVEDQTDEDFFDKLVEDDLGPAESGPKCNEGNDSDDAKAFTNLSSGDSVAAVS
EDSGANAKAKDDENKAFANLTIGDSAAVSEDLGARTKTKDEIGPDESNSFGFRNVIESKN
SVIDDGVIQSNNDGAGSQLTSDSRMSKSNDSGASGVKEIGWGSFHADSAENGIHGFGSYS
DFFNELGDSSGDFPPKVDGNLSTKSKTAPSNEDHTAQGLNHSVNNEQYQEGQAYGATVEE
SRNEQDLNSTEYWESLYPGWKYDPNTGQWYQVDSFDVPANAEGSFGTDSASDWATVSDSK
TEVSYLQQTAHSVAGTVTETSTTGSLSNWDQVSQVTNGYPAHMVFNPEYPGWYYDTIAQE
WRSLEGYNSSLQPTAQAQNDTSLYGEYRQDSNYGSLGVGSQVQDSSWAGSYSNYNQQGSN
MWQAQTGTNNEAFSSFGGNQQMSNSFGSTVNKDQQKSLNSFGAVPLYNKASQGHGEANGT
VGFQSFLPGGNFSQQFNQGNAKLIEQTQFSDDYYGNQKPLNYSQQPFQSGNQFSYAPSVG
RSSAGRPPHALVTFGFGGKLIVMKDNSSLTNLSYGSQDPVGGSVSVLNLIEVFTEKTDAS
SFGMSTCDYFRALCQQSFPGPLVGGSVGSKELNKWMDERIANCESSEMDYRKGKVLRLLL
SLLKIACQHYGKLRSPFGTDNVSRESDTPESAVAKLFASAKSNGVQFSEYGAFSHCVQKM
PSEGQMQATASEVQNLLVSGRKKEALQCAQEGQLWGPALVIASQLGEQFYVDTVKQMALR
QLVAGSPLRTLCLLIAGQPAEVFSADTTSEINRPGAVNTPQQPAQFGANKMLDDWEENLA
VITANRTKDDELVIIHLGDCLWKDRSEITAAHICYLVAEANFESYSDSARLCLIGADHWK
SPRTYASPEAIQRTELYEYSRVLGNSQFILLPFQPYKLIYAHMLAEVGRVSDSLKYCQTI
LKSLKTGRAPEVETWKQLVLSLEERIKTHQQGGYSVNLVSTKFVGKLLNLFDSTAHRVVG
GLPPPAPSTYQGSTQGNDHYQQPMGPRVSASQSTMAMSSLIPSASMEPISEWAADGNRKP
MHNRSVSEPDFGRTPRQVDSSKETASPDAQGKASGGTSRFARFGFGSQLLQKTVGLVLRP
RPGKQAKLGETNKFYYDEKLKRWVEEGVEPPAEEAALPPPPTTTAFHNGVSDYNLKSVLK
KEGSPTKGSPDLQTSTPPGPTSGTPPIPPSSNQFSARGRLGIRSRYVDTFNQGGGSPANL
FQSPSVPSVKPAVAANAKFFIPTLGSSSEQTMEAIAESVQEDVATKEVPSTSARNDPFQT
PLPPSSTTMQRFPSMGNIHGMEVATNANGSVPPHSRRTASWGGSSNDVFSPPPKMGEIKP
LGEALGMSPAMFRPSEPSMMRVPMNGGSFGDDLHEVEL
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaatcctccatttcaggtggaggatcagaccgacgaggatttctttgataaa
ttggttgaagatgacctggggcccgccgaatcaggccccaaatgcaacgaaggaaacgat
tccgatgacgctaaggcattcaccaatctgagtagtggtgattctgtagcagctgtatct
gaggattctggtgccaatgccaaagccaaagacgacgaaaataaggcgttcgccaatctg
actattggtgattctgcagctgtatctgaggatttgggtgccagaaccaaaacaaaagat
gaaataggtcctgatgagtcgaattcattcgggttccgtaatgtaatagagtcgaagaat
tcggttattgatgacggagtgattcagtccaataatgatggggcgggatctcaattgacg
tcagattccagaatgagcaagagcaacgattctggagcttcaggggtgaaggagataggg
tggggttcgtttcatgctgattctgcagaaaatgggattcatgggtttggatcgtactca
gattttttcaatgaattgggagatagttctggggatttccccccgaaagtagacggaaat
ttgagtactaaatcaaaaactgcacccagtaatgaagatcatacagcacaaggtttgaac
cattcggttaataacgagcaatatcaagagggccaagcttatggagcaactgtggaggaa
agtagaaatgagcaggatctaaatagtacggagtattgggaaagtctttatccagggtgg
aagtatgaccctaacacggggcaatggtatcaagtggacagtttcgatgtgcctgcaaat
gctgaagggagcttcggcactgattcagccagtgattgggccactgtttctgatagcaaa
actgaggtttcttatttgcagcaaacggctcattccgttgcgggaactgtgactgaaact
agcacgactggtagtttgtcaaactgggatcaggtctcacaagtgactaatgggtaccca
gcacatatggttttcaatcctgaatacccgggttggtactatgatacaattgcgcaagaa
tggcgctcattggaggggtataattcctctctgcaaccgactgctcaagcccagaatgat
actagtttatatggtgagtacaggcaagatagcaattatgggtcgctaggggttggtagc
caagttcaagacagcagctgggctgggtcttatagtaattacaatcaacagggttcaaat
atgtggcaagctcagactggaactaacaatgaggctttttcaagttttggtggaaaccag
cagatgagtaattcgtttggttcaacagtcaacaaggaccagcagaagtcattaaattct
ttcggagcagttcctttgtacaacaaagcgagtcaaggtcatggtgaggctaatgggact
gtcgggttccaaagtttcctcccaggtggtaactttagccagcagtttaatcaaggaaat
gcaaagctgatcgaacaaacacaattctcagatgattactatggcaatcagaaaccttta
aattattcccagcaacctttccagagtggcaatcagttttcgtatgctcccagcgtagga
agatcatctgctgggcgtcctccacatgccctagtaactttcggatttggtgggaaactc
attgtaatgaaggacaatagtagtctcacgaatttgtcatatggaagtcaggatcctgta
ggaggctcagtttctgtcctgaacttgatagaagtttttacggaaaagactgatgcttca
agttttggaatgagtacttgtgattattttcgtgctttgtgccaacaatccttcccaggt
cccttggttggagggagtgttggaagcaaagagttgaacaaatggatggatgagaggatt
gctaactgtgaatcatcagagatggactacaggaaaggcaaagtattgaggttgcttctt
tctttgcttaagatagcttgtcaacattatggaaaacttcgatctccttttggaaccgac
aatgtatcgagggaaagcgacactccagaatcagcagttgctaaactttttgcatccgca
aagagcaatggtgtacaattcagtgaatatggtgcttttagtcactgtgtgcagaaaatg
ccttcagaaggacaaatgcaggcaactgcttctgaggtacaaaatcttctggtttctggt
agaaagaaagaggctttacaatgtgcacaagaaggtcagttgtggggacctgcgcttgtt
attgcttcacagcttggggaacagttttatgttgatactgtgaagcaaatggcacttcgt
cagctggttgcaggatcacccttgcggacattatgcctgctcattgccgggcaacctgct
gaagtgttctctgctgacactacatctgagatcaatcgacccggtgctgttaatacccct
caacaacctgcacaatttggtgcaaataaaatgcttgatgactgggaggagaatctggct
gtgataactgcaaacagaacaaaagatgatgaactcgtaattattcatcttggagattgc
ttatggaaggataggagtgagattactgcagcacacatctgctatttagtggcagaagca
aattttgagtcatactccgatagcgcaagactatgtctaattggagcagatcactggaaa
tcgcctcgaacttatgctagtccggaggccattcagaggactgaactatatgaatattca
agggtgcttggaaactctcagtttatccttctaccatttcagccatataagctcatatat
gcgcacatgcttgccgaagttggaagagtttctgactcgttgaagtactgtcaaacaata
ctaaagtctttgaaaaccggaagagcaccagaagtggaaacgtggaagcagctagtatta
tctcttgaggagaggattaaaacccatcagcagggtggatactctgtaaatttggtttct
acaaagtttgtaggtaaattgctcaacttgtttgatagtactgcacatcgtgttgttggg
ggcctaccaccacctgcaccatccacataccaaggaagtactcaaggtaatgaccattac
cagcagccaatgggccccagagtatctgctagtcaatcaacaatggccatgtcgtcgtta
attccttctgcttcaatggaacccataagtgagtgggcagctgatggcaatagaaagcca
atgcataatagaagtgtttcagagccagactttggtagaactccaagacaggttgattca
tcaaaggaaacggcttcacctgatgcccaaggaaaagcctcagggggtacttctcgcttt
gctcgttttggtttcgggtcacagctgttgcaaaagactgtgggtctagtcttaagacct
cgtccaggcaaacaggctaagttgggtgaaacaaataagttctactatgacgaaaaactt
aagagatgggttgaggaaggtgttgaacccccagctgaagaagctgccttgcctcctcct
ccgacaactacggccttccacaatggtgtgtctgattacaacttgaaatctgttttgaag
aaagaagggtctcccactaagggcagcccagatttacaaacttcaacccctccaggacca
acttcaggaaccccacctattccacccagctcaaatcaattctcagctcgtggacggttg
ggtattcggtccagatatgttgacacattcaaccaaggtggtggaagcccagcaaacttg
ttccagtcaccttctgttccatcagttaagcctgctgtggctgccaatgcaaagtttttc
attcccaccttaggatcatcaagtgaacagactatggaggctatagctgaaagtgtgcaa
gaagatgttgcaactaaagaagttccctcaacatctgctaggaatgacccattccagact
cctctgcccccatcttcaacgaccatgcaaaggttcccgagcatgggtaatattcatggc
atggaagttgctacaaatgctaatggctctgttccaccccactcacgacggacggcctct
tggggtggaagctccaatgatgtatttagccctcctcccaaaatgggggaaataaaacct
ctaggggaggcattaggcatgtccccagctatgtttaggcctagtgagccttctatgatg
cgcgtgccaatgaatggtggcagttttggtgatgatcttcatgaagtggaactttga
DBGET
integrated database retrieval system
