Prunus mume (Japanese apricot): 103337271
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Entry
103337271 CDS
T03196
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmum03400
]
103337271
Enzymes [BR:
pmum01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
103337271
DNA repair and recombination proteins [BR:
pmum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
103337271
Prokaryotic type
103337271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
103337271
NCBI-ProteinID:
XP_016651220
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All DBs
Position
LG7:complement(6620236..6623790)
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AA seq
491 aa
AA seq
DB search
MAANSAAVQPGRVRILKEASKSAGQNMGPVVYWMFRDQRVRDNWALIHAVEQAHKANVPV
AVAFNLFDQFLGAKARQLGFMLRGLRQLHRDLEETHQIPFFLFRGNAEDTIPNFVSECGA
SLLVTDFSPLREVRKCKEEICKRVSDFVTIHEVDAHNVVPLWAASEKLEYSARTMRSKIN
KKLPEYLIEFPMLQPPVTKWVGASRLIDWDSLIDEVLRKGAEVPEIDWCEPGEKAAMEVL
MGSKNGFLTKRLKGYSSDRNNPLKPRGLSGLSPYLHFGQISAQRCALEARSIRKLCPEAV
DAFVEELIVRRELADNFCFYQPHYDSLQGAWEWARKTLMDHAFDKREHIYTKEQLEKAQT
ADPLWNASQLEMVYYGKMHGFMRMYWAKKILEWTRGPEEALEISIYLNNKYEIDGRDPNG
YVGCMWSVCGVHDQGWKERPIFGKIRYMNYAGCKRKFDVDGYIAYVKRLGETKKRKAESL
LGRKAKELCTY
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggccgctaactccgccgccgtgcaaccgggtcgggttcggattctgaaagaagcgtcc
aaatcggcgggtcaaaatatgggtcccgtggtctactggatgttcagagaccaaagggtt
agagacaattgggccttgatccacgccgttgagcaggcccacaaggccaatgtccccgtg
gctgtggcgttcaatctgtttgatcagtttcttggcgccaaagcccgccagttagggttt
atgctgaggggtttgcgacaattgcatcgtgatcttgaagaaacgcatcaaattccattt
tttctcttccggggaaatgctgaggacactatacccaattttgtgagtgaatgtggggct
tcacttttagtaacggacttctcacccttacgggaagttcggaaatgtaaagaggaaatt
tgcaagagggttagtgattttgtgacaatacatgaagttgatgcacacaatgtggtgccc
ctttgggcggcatcagagaagttggagtatagtgctaggactatgaggagtaagataaac
aaaaagcttccagagtacctaatcgaatttcctatgctgcagccaccagttacaaaatgg
gtgggcgctagtcgattgattgactgggatagcctcattgacgaagttttgaggaaagga
gcagaagttcctgaaatcgattggtgtgaaccgggagaaaaggcagcaatggaagttttg
atgggtagcaaaaatgggttcttgacgaaaaggttgaagggttattcgtcagaccggaat
aaccctttgaaaccaagaggtctctcgggtctttctccctatttgcattttgggcaaata
tctgcacagaggtgcgccttagaggcacgtagcatccggaaactctgtcctgaggcagtc
gatgcatttgtagaggagttgattgtgcgccgagaacttgccgataacttctgcttctac
cagcctcattatgattcattacaaggggcatgggaatgggcacgtaagactttgatggac
catgcttttgataagcgagaacatatttacactaaggagcaattggagaaggcgcaaaca
gccgatcctctctggaatgcctctcaattggagatggtttattatgggaagatgcatggt
tttatgcggatgtattgggcaaaaaagattcttgagtggacaagaggtcctgaagaagcc
cttgaaatatccatatacctaaataacaagtatgaaatagatggaagggatccgaatggg
tatgttggttgcatgtggtcagtatgtggtgttcacgaccagggttggaaggaacgtcca
atttttgggaaaatacgttacatgaactatgcaggctgcaaaaggaaatttgatgtggat
ggatacattgcctatgtaaagaggcttggtgaaaccaagaagagaaaagcagaaagtcta
cttggtagaaaggcaaaagaactctgcacttattag
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