Prunus mume (Japanese apricot): 103337413
Help
Entry
103337413 CDS
T03196
Name
(RefSeq) nucleoporin NUP152
KO
K14295
nuclear pore complex protein Nup50
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103337413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103337413
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103337413
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ran_BP1
EVH1_PP4R3
SPCC191_01
Motif
Other DBs
NCBI-GeneID:
103337413
NCBI-ProteinID:
XP_008238792
UniProt:
A0ABM0PF90
LinkDB
All DBs
Position
LG7:8129921..8136997
Genome browser
AA seq
516 aa
AA seq
DB search
MMTKGTKRFAVSDSNPDSAFRNKRIMAGSSCDANRAEPSQEQSIDTPVLNAHRAASSQQH
VRALNTQFASWVQSQLKNHPDELWEDGLRDYLAHASNIMEKFSDVVNWLKVNAAKGENLA
GAPTAEKKMVPESTNKDKYFQPKPLFAPVGTTANFASSGLYSNSQSSAGVFSNNHCSTGE
YPFRQRSEGVSSNSQSSSGVFSSQSSPALWSSGVFPSSQISTGVFSNSQSSTGVFSNNHI
STGELPTGQSSAGVSSNSQSSSGVSSSQISPVFSSVQSSGIFSNTQSSGVFSNSQSSAAF
SKTPSFGLFSNSQSSGLSSNSQSSATFSSTPSFGLFSNSQSSGLSSNSQPPALFGIQSSV
PTKHDASDEADVENDLEQPSSPSVKKSEEKGVVLVHEVKCKLYVKSSDPADRDAWKDKGT
GQLSIKCKEGVSKGTKESKPTIIVRNDVGKVQLNALLYSGIKTNLQKNSIVAIFHTMGEG
DGNDGSAVARTFLIRLKTEEDRNKLATAIQEYAPAS
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgaaagggacgaaacgtttcgccgtatcggactctaatcctgactcggccttc
cggaataaaaggataatggcaggatcctcatgtgatgctaatagggcagagccttctcaa
gagcagtcgatagatacacctgtattgaatgcacatcgggctgcgtcatcacagcagcat
gtgagagctctcaacacccaatttgcaagttgggtacaatcacaactaaaaaatcatcct
gatgaactttgggaagatggtctccgagactacctagctcatgcttcaaacattatggaa
aaattcagtgacgtcgttaactggcttaaagtaaatgctgcaaaaggagaaaatttggca
ggggctccaactgctgaaaagaaaatggtgcctgagtccacgaataaggataaatatttt
cagccaaaacccctgttcgcaccagttggtacaactgctaactttgcaagttctggatta
tactccaacagccaaagctctgcaggagtcttctccaacaaccactgctccacaggagaa
taccctttccgccaaaggtctgaaggagtatcttccaacagtcaaagctcttcgggagta
ttcagcagccagagctcaccagctttatggagttctggagtgttccccagcagccaaatt
tctactggagtcttctccaacagccaaagttctactggagtcttctccaacaaccacatc
tctacaggtgaactacctactggccaaagttctgcaggagtatcttccaacagccaaagc
tcttcaggagtatccagcagccagatctccccagtcttctccagtgttcaaagctccgga
atattttccaatactcaaagctctggagtattttccaatagtcaaagttctgcggcgttc
tccaaaactcccagttttgggttattctccaacagtcaaagctctggattgtcctccaat
agtcaaagttctgcaacattctccagcactcccagttttggattattttccaacagtcaa
agctctgggttgtcctccaacagtcagccccctgccttgtttggaattcaaagttcggtt
cccacaaagcatgatgcttcagatgaagcagatgttgaaaatgacttggagcagcctagc
agcccatctgtgaaaaagtctgaagaaaagggtgttgtcctggtccatgaagtcaagtgc
aaactttatgtgaagtcaagtgatccagcagatagagatgcatggaaagataaaggcaca
gggcagctatctattaaatgcaaagagggtgtcagcaagggtacaaaagaatcaaaacca
acaatcattgttcgaaatgatgtggggaaagtgcagcttaatgctttgttatattcaggc
atcaagacgaatctacagaagaattccattgttgcaatattccatactatgggcgaaggt
gatggaaatgatggtagtgctgtggcgcgtaccttcttgattaggttgaaaacagaggag
gatagaaacaaactggccacagcaatccaagaatatgcccctgcatcctga
DBGET
integrated database retrieval system
