KEGG   Prunus mume (Japanese apricot): 103337463
Entry
103337463         CDS       T03196                                 
Name
(RefSeq) lysine-specific demethylase 5B
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
pmum  Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:pmum00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pmum01009]
    103337463
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pmum03036]
    103337463
Enzymes [BR:pmum01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     103337463
Protein phosphatases and associated proteins [BR:pmum01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103337463
Chromosome and associated proteins [BR:pmum03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    103337463
SSDB
Motif
Pfam: PLU-1 JmjC PHD JmjN zf-C5HC2 ARID KDM5_C-hel PHD_5 BT_3657-like_N YDR124W_N DUF5661 KBP_C PHDvar_NSD
Other DBs
NCBI-GeneID: 103337463
NCBI-ProteinID: XP_008238846
LinkDB
Position
LG7:8511034..8525539
AA seq 1853 aa
MGKGRPRAVEKGVVGPNLSVSASGSLNIPSAPVYYPTEDEFRDPLEYIYKIRPEAELYGI
CRIVPPKNWKPPFALDLDSFTFPTKTQAIHQLQVRPASCDSKTFELEYNRFLEDRCGKKL
RKKVVFEGEELDLCKLFNAVKRYGGYDKVVKGKKWGEVARFVRPARKISECSKHVLCQLY
RDHLHDYEKYYNKLNKEVVRSRKRGMHEEKRSEQNVECSSSKRRRTTNEGEKVKVCKVEK
EDEEHDQICEQCRSGLHGEVMLLCDRCNKGWHIHCLSPPLKQVPPGNWYCLDCLNSDKDS
FGFVPGKRFSLEVFRRVANRSKRKWFGSGSASRVQIEKKFWEIVEGSIGEVEVMYGSDLD
TSIYGSGFPRGNDQRPDSVEAKIWDEYCGSPWNLNNLPKLKGSVLRTVHHNIAGVMVPWL
YVGMLFSSFCWHFEDHCFYSMNYLHWGEPKCWYSVPGSEASAFEKVMRNSLPDLFDAQPD
LLFQLVTMLNPSVLQENGVPVYSVLQEPGNFVITFPRSYHGGFNLGLNCAEAVNFAPADW
LPHGGFGAGLYQLYRKTAVLSHEELVCVVAKSDCDSRVTPYLKKELTRIDSKEKTWRERL
WRKGIIKSSPMPSRKCPEYVGTEEDPTCIICKQYLYLSAVVCRCRPSAFVCLEHWEHLCE
CKSRRLRLLYRHTLGELHDLVLAMDKHCFEETTESRTLRRQISCPDEPTALKKKVKGGHA
TFSQLAEKWLLRSCKISQSPFSRDEYVSVLKEAEQFLWAGSEMNPVREMAKKLIRSQKWA
EGVRDCLSKIETWSSHCGNGIERAHLEYINELLSFDAVPSYEPGHLNLKNYAEQARGLIQ
DIESAMSSCPKIPELELLYSRACEFPIYVKESENLLQRISSAKVLMEGIRNCISEKRPAA
IDIDVVYKLKLESSELQVQLPDIEKLSDLLGKAESCRARCGEILKDHISLKDVEVLLQEL
DGFTVNIPELKLLSQYRTDAVSWISRFDAVLGSSHEREDPNNAVDELMLILKDGASLRIK
VDQLSLVECELKKARCREKALRMRDTKLSLDFIQEVIMEATVLHIEGEKLFVDMSKVLGA
ALQWEERAKYILAHEAHISDFEDVIRSSEHIYVNLPSLLDVKDTLSKAMAWLRSTEPFLV
FCSPLVPASSSLLNVDTLKELVSESKCINVSLKEKMMLETVLMNCEEWKHGACSLLQDIS
CLFDMRISGDGIRDGLISKIESLVKRIESMENTGLSLAFDFDELAKLKDVCSMLQWCKKA
LSFCSGAPSFEDVDSLMNGVENSCGTYASSALWCSLVEGVKWLKHATKVISASCNFGRCK
LSEAEEVLSNSQSLSVSFPLMFGQVESAIQKHKYWLEQVHQLFSLRPGERSWSLMLQLKE
LGVSVAFSCTELDLIISEVGRVESWKRQCMDIVKSLIEDEDSLLGALEKISQTLDRSMHI
YDKPHGLKESGYYACCSSGSLDQEFLTCSSCKDCYHGRCLGTSIVDAKHAKYVCPCCQYL
ECGTTSQNGGSLKFGGMRPELQKIIEHLSGEEDFCVCIEEREVLKEVMKKALACKSRLKE
IVDFALAYSDKDLSVIFGKLSTALKAREMEGVHDHEGDCNLMLVLSRYSWKVKVNKSLDG
SQKPTIQQIQQHLKEGAALNIPPGDYYRQKLTEVKCIGLQWADNAKKVAADSGALPLGKV
FELVLEGENLPVRMEKELKLLKTRSMLYCICRKPYDQRATPMIACDQCDEWYHFDCLKLR
SAPEVYICPACEPRAQETEVFSTASGVDHERCTDAKFVEPKTPSPRHTKCRTNLKKVESD
LNQKMCAITDPNNLFRCSSGIECLWWRNRKPFRRAAKRRAELESLSLFSHLQQ
NT seq 5562 nt   +upstreamnt  +downstreamnt
atggggaaaggaagacctagggctgtggagaagggagtggtaggtccaaatttgagtgtt
tcagcatctggatcattgaatataccatctgcacctgtatattatcctactgaggatgaa
tttagagaccctttggagtatatatataagatcaggccagaggctgagttatatgggatt
tgtaggatagttccacccaagaactggaaacccccatttgctttggatttggattcattc
acattccccacgaaaacgcaagccattcatcagttgcaggtacggcctgcttcgtgtgat
tccaagacttttgagttggagtacaataggttcttggaggaccgttgtgggaagaagttg
aggaagaaggtggtttttgaaggggaggagttggatttgtgtaagttgtttaatgctgtg
aagcggtatggagggtatgataaggttgtgaaggggaagaagtggggtgaggttgctcgt
tttgtgaggccagcgagaaagatttcggagtgttcgaagcatgtattgtgtcaattgtat
cgagaccatttacatgattatgaaaagtattataataagctgaacaaagaggtggttagg
agtcgtaaaaggggtatgcatgaggagaagaggagtgaacaaaatgttgaatgttccagc
tccaaaaggaggcgaaccactaatgagggtgagaaagttaaggtctgtaaggtagagaag
gaggatgaggagcatgatcagatatgcgaacaatgcagaagtgggttgcacggcgaagtg
atgcttttgtgtgacaggtgcaataaggggtggcacattcattgtctctctccaccattg
aaacaggtcccacctgggaattggtattgtttggattgcttgaattctgacaaagatagt
tttggttttgtgcctggtaagcgtttttcactggaagtttttaggcgtgtggctaatcga
tcgaagaggaaatggtttgggtcagggtctgcatcacgggttcaaatagagaaaaagttt
tgggaaattgtggagggttccattggtgaggttgaagttatgtatggcagcgacttggac
acttctatttatgggagcggttttccacgtggaaatgatcagagaccagattcagttgag
gccaagatatgggatgaatactgtggtagcccatggaatctgaataacttgcccaagttg
aaagggtcagtgcttagaactgttcatcataacattgctggtgttatggtgccttggctg
tatgttgggatgctgttctcatctttttgttggcattttgaagatcattgtttttactcg
atgaattatttgcactggggagagccaaaatgttggtacagcgtccctggtagtgaagct
agtgcatttgagaaggtgatgcgtaacagtcttcctgatctttttgatgcacaacctgat
ttgctctttcagctcgtcaccatgttaaatccatctgttttgcaagagaatggagttcct
gtttatagtgtgttacaggagcctggcaattttgtcatcaccttccccagatcttaccat
ggaggttttaatcttggtttgaattgtgcagaagctgtcaattttgctcctgcagactgg
ctacctcatggtgggtttggagcagggctgtatcagctttatcgcaaaactgctgttctg
tctcatgaggagcttgtttgcgtggtagccaagagtgactgtgacagcagagtaacacct
tatttgaagaaagaattgacaagaattgacagcaaggaaaaaacctggagggagcgcctt
tggagaaaggggatcattaaatcatctcctatgccctctaggaaatgccctgaatatgtt
ggtaccgaagaggatcctacgtgcattatatgcaaacaatatctttatctttctgctgtt
gtttgtcgttgtaggccatccgcatttgtatgtctggagcattgggaacacctttgtgaa
tgcaaatccagaagacttcgtcttctatatcgtcatacactgggagagttgcatgacttg
gtgcttgcaatggataaacattgtttcgaggagacaacagaaagtaggactttaagaagg
caaatctcatgccctgatgaaccgactgctttgaaaaaaaaggtcaaagggggccatgct
actttttctcaactagcagaaaaatggcttttgcgctcatgtaagatttctcagagtccg
ttttcgagagatgagtatgtttctgtattaaaggaggctgaacaatttctttgggctggt
tctgagatgaatcctgtgcgggaaatggcaaaaaaattgattcgatctcagaaatgggct
gaaggtgtaagagattgtctatctaaaattgaaacttggtcatctcattgtggcaacggt
atagagagagctcatttggaatatattaatgagttgctgagttttgatgcggtgcccagt
tacgagcctggtcatcttaatttgaagaattatgctgaacaggcaagggggttgatacag
gacattgagtctgctatgtcatcgtgcccaaagatacctgagttggaattgctgtactcc
agagcctgtgagtttccaatatatgtgaaggaaagtgaaaacttactacaaagaatttca
tcagcaaaggtcttgatggaaggcataagaaattgcatctcagaaaaacgtcctgctgca
attgacattgatgttgtttacaagttgaaattggagagttcggagctccaagttcaactc
ccagatatagaaaagctttcggatctattagggaaggctgaatcatgtcgtgcgcgatgt
ggtgaaattttgaaggatcatattagccttaaggacgttgaggtgcttcttcaagagctg
gatggttttactgttaacataccagagctgaagcttctgagtcagtaccgcactgatgca
gtttcttggatttctcgttttgatgctgttcttgggagcagtcatgaaagggaggatcca
aataatgcagttgatgagctaatgcttattctaaaagatggagcatctttgagaattaaa
gttgatcagttgtctttagtagagtgtgagttgaagaaggctcggtgcagggaaaaggcg
ctgaggatgcgagatactaaattgtctctggacttcattcaagaagtgataatggaggca
acagtgttacatattgagggagagaagttattcgttgatatgtcgaaagtactgggtgct
gccttgcaatgggaggaaagagcaaaatatattcttgcacatgaggcccatatatctgac
tttgaggatgttattaggagttcggaacacatttatgtgaatttaccttctctccttgat
gtcaaggatacactatcaaaagctatggcctggttgaggagcacagagccatttttggtg
ttttgttctcctttggtacctgcttcaagttctttgctgaatgttgacaccttgaaggaa
ttagtttcagagtcaaagtgtataaatgtatccttgaaagaaaaaatgatgcttgagact
gttctaatgaactgtgaggaatggaagcatggtgcttgctctctactgcaagatataagc
tgcctattcgatatgaggatcagtggtgatggaataagagatggtcttatttccaagatt
gaaagtctagttaaaagaatagaatccatggagaacactggtttatctcttgcttttgac
tttgacgagcttgcaaaacttaaggatgtgtgttctatgctgcaatggtgtaagaaggca
ctttctttctgctcgggtgctccttcttttgaggatgtggatagtttgatgaatggtgta
gaaaattcatgtggtacatatgcctccagtgcactgtggtgctcattggttgaaggggtc
aaatggcttaagcatgctacaaaggttatttctgcatcatgcaattttggaagatgcaag
ttaagtgaagctgaagaagttctttctaattctcagagtcttagtgtttccttccctttg
atgtttggtcaagttgaaagtgccattcagaaacacaagtattggcttgagcaagtgcat
caacttttcagtttaaggccgggggaacgatcttggtcactaatgttacagctaaaggaa
cttggagtttctgttgctttcagttgcacagaactagatttgatcatatctgaagttgga
agggttgagagttggaaacgacagtgcatggatattgtcaagagtctaattgaagatgag
gattcattgcttggtgctctagaaaagataagtcagactctagatagatctatgcacata
tatgataagccgcatggcttgaaagagagtggttattatgcgtgctgctccagtggttct
ctggatcaggaatttcttacttgttcttcgtgcaaggactgctaccatgggcggtgtcta
ggaacttccatagtagatgcaaaacatgcaaagtatgtatgcccttgttgccaatatctg
gaatgtggaacaacttctcaaaatggaggcagtctgaaatttggagggatgcgtccagaa
ctgcaaaaaattattgaacatctatccggtgaagaagatttctgtgtttgtattgaagaa
agagaggtactgaaagaagtcatgaagaaagctctggcatgcaaatcccgcttgaaagaa
atagtggattttgcattagcttattctgataaagatctgagtgtcatctttggaaaacta
agcacagctttaaaggccagagaaatggaaggtgtacatgatcatgaaggcgattgcaac
cttatgttggtgttatcaagatactcatggaaagtcaaagtcaataagtcactggacggt
tcacaaaagcccacaatccaacagattcagcagcatttaaaagagggagctgccttgaat
attccacctggagattactataggcagaaacttacagaagtgaagtgtattggcttgcag
tgggcagataatgctaagaaggtagctgcagattctggggctctgccactgggtaaagtt
tttgaacttgttttggagggtgaaaacttgcctgttcgtatggagaaggaacttaagtta
ttgaaaactcggagtatgctttattgcatatgtcgaaagccgtatgatcagcgggcgacg
ccgatgattgcatgtgaccaatgtgatgagtggtatcactttgattgccttaaattacgt
tctgcaccagaggtttacatttgccctgcatgtgagcctcgagcacaagagactgaagtg
ttctctacagcgtcgggggtggatcatgagagatgtactgatgccaaatttgtagagcct
aaaacgccttcgcctaggcacacgaagtgcaggacgaacctaaagaaagtagagtctgat
ctaaaccaaaagatgtgtgcaattacagatcccaacaatctttttaggtgttctagtggg
atagagtgtttatggtggcgaaatcggaaaccgttcagaagggcggccaaaagacgcgcc
gagcttgaaagtctctctctattttctcatttgcaacaataa

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