Prunus mume (Japanese apricot): 103337591
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Entry
103337591 CDS
T03196
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
KO
K24738
rabconnectin-3b
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
103337591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103337591
Membrane trafficking [BR:
pmum04131
]
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
103337591
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
ASA1
EIF3I
WD40_Gbeta
Beta-prop_WDR3_2nd
PAC11
Beta-prop_DCAF12
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
103337591
NCBI-ProteinID:
XP_008238978
UniProt:
A0ABM0PFQ2
LinkDB
All DBs
Position
LG7:complement(9484901..9492778)
Genome browser
AA seq
1512 aa
AA seq
DB search
MKCRSVACIWSGTPPSHRVTAAAALSHPPTLYTGGSDGSIIWWNLHSSDSNLEIVPMAML
CGHAAPIADLGICDPLVVSGSEGRDSLGDGDGDGDGEVSSSPHSHGALISACADGMLCVW
SRSSGHCRRRRKLPPWVGSPSVVRTLPSNPRYVCIACCFVDSVHLLDHHSVESSEAGEVL
GDRESQHKKPPKCTVVIVDSYTLSIVQTVFHGNLSIGSLKFMDVVSLTEDQEKHAVVLAD
SFGRLQLVSIPKNPHQDKEGGTGLHPSSQLEMTVCAEGLSEGGNVMSIATCGNVVAFVLK
SRCIFRLLPSGNTIGEISSVDDLLCEKSNSTQSHMVGGLFFEIENVGNLPNTQESDEIFS
RNFAIWNNKGLSVVYSISYSKGMFKCESLCEIPADTHPLDVRLSISFIQMGHYILRIESL
CFDAEEPLQWKPHVTIWSTCRKHDDHGNLCLWFKLHGVGCSLVDWTANSTSSNESECPGD
METKLTSSKSCVSSSGSVNGYDNDNLGLVNKRGVVSSSMVISETFFAPYAVVYGFFTGEI
EIVRFDLFEGLSSLGGSSHHEVKPQISRQFFLGHTGAVLCLAAHRMVGIAKGWNFNQVLV
SGSMDCTVRIWDLDTGNLITVMHQHVGPVRQIILPPAHTYCPWSDCFLSVGEDSCVALAS
LETLRVERIFPGHPSYPAKVVWDGGRGYIACLCRNHSGTSDAVDILYIWDVKTGARERVL
RGTPSHSMFDHFCKGISMNSISGSVLNGNTSVSSLLLPVIEDGISTHSHPNNSEKLGTST
NLVPGTMVESNTSRTSKGDSEKLFPAPAATLQSNKHPIKSYCPFPGIAALSFDLASLVFP
YRKHDLIASGSDNKQDNYVKGQGSETSSPHHKPLGNGPGVHRTSNAIVEEIEWIKTLEEC
LLRFSLASLHLWNVDPELDNLLITDMKLKRPESFIVASGFQGDKGSLTLTFPNLSATLEL
WRMSSEFCAMRSLTMVSLAQCMISLSHTSSNASSALAAFYTRNFADKIPDIKPPLLQLLV
SFWQDESEHVRMAARSLFHCAASRAIPLPLCNQKASGRTNLSSLSGLGENEQVNSNIEET
SANILHSDQLAETQRISKVEEFNILAWLQSFEMQDWISCVGGTSQDAMTSHIIVAAALAI
WYPSLVKPCLAMLVVHPLMKLVMAMNEKYSSTAAELLAEGMESTWKQCISSEIPRLIGDI
FFQIECVSGPSVNSAAQSLAVPVGLREILVGVLLPSLAVADVPGFLTVMESQIWSTASDS
PVHLVSLMTLIRVVRGSPRYLAQYLDKVIDFILQTVDPSNSVMRKTCFQSSMTALKEVVR
AFPMVALNDTWTRLAVGDVIGERNNATIRVYDMQSVMKIKVLDASGPPGLPNLLAAGSEM
MLVTAISALSFSPDGEGLVAFSEHGLMIRWWSLGSVFWEKLSRNLVPVQCTKLIFVPPWE
GFSPNSSRSSIMASIMGHDRQINIQEGTKGLSQADNLKLLIHNLDLSYRLEWVGKRKVLL
TRHGHDLGTFPL
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgccgatccgtcgcgtgcatatggtcaggcacgcctccctctcaccgagtcaca
gccgctgcagctctcagccaccccccaacgctctacaccggcggatccgatggttccatc
atctggtggaacctccattcttccgattccaacttggagattgttccaatggctatgttg
tgtggccatgctgcgcccatagccgaccttggcatttgtgatccacttgtggtttcgggg
agtgaaggaagagactctttaggagatggtgatggtgatggtgatggtgaggtgagctct
agcccccatagtcatggtgcgttaatcagtgcgtgtgctgatggcatgttgtgcgtgtgg
agcagaagcagcgggcattgccggcgcagaaggaagttgccaccttgggttggcagtccg
tccgtggttaggacattgccttcgaatccacggtatgtatgtattgcatgctgttttgtt
gatagtgtgcatttgttggaccatcattctgttgaatcaagtgaagcgggggaggtgttg
ggggatagagaatctcagcataagaaaccccccaaatgcactgtggttattgttgactcc
tatacgcttagcattgtccaaactgtttttcatggaaacttgtctattggttcattgaag
tttatggatgtggtttcattaactgaggatcaggagaagcatgctgtagttctggcagat
tcatttggtaggctacagctggtttcaataccaaagaatccgcaccaagataaggagggt
ggcactggtttgcatccaagttctcagttggaaatgactgtttgtgcagagggattaagt
gagggaggaaatgtaatgtcaattgcaacttgtgggaatgttgtcgcttttgtgttaaaa
agtcgctgcatatttagactattgcctagtggcaatacaataggagagatttcttctgtg
gacgatctcctttgtgaaaaaagtaattctactcaatcacatatggtgggtggtttgttt
tttgaaattgaaaatgttggcaatttaccaaatacccaagaatctgatgaaattttttca
agaaactttgctatttggaataacaaaggtctttcagttgtttactcgatatcatattct
aaaggtatgtttaagtgtgagtcactctgtgagatccctgccgacactcatccacttgat
gtgagactatcaattagtttcattcaaatgggccattatattcttcgcattgaatcactt
tgctttgatgctgaagaacctttacagtggaaaccccatgttacaatctggtctacatgt
cggaaacatgatgaccatgggaatttgtgcctatggtttaaattgcatggcgtaggctgt
tctttggtagactggactgcaaattctacctcaagtaatgaatctgagtgcccaggtgat
atggagaccaaactaacatcttcaaaatcttgtgtttcaagctcaggaagtgtaaatggt
tatgataatgacaatcttggtttagttaataaaagaggggttgtgtcttcttccatggtt
atttctgaaacattctttgctccttatgctgttgtgtatggcttctttactggagaaata
gagattgttcgatttgatttgtttgagggcctatcttctcttggtgggagctcacatcat
gaggtgaagccgcaaatatctagacagttctttttagggcacacaggtgctgttctctgt
ttggcagcacataggatggtgggtattgccaaagggtggaatttcaatcaggttttggtg
tctggaagcatggattgcacagttcgcatatgggatcttgacactggaaatctgatcact
gtaatgcaccaacatgtgggcccagtgcgccaaataattcttcccccagctcatacctac
tgtccttggagtgattgttttctctcagttggggaggactcatgtgttgcactagcttct
cttgagactttgcgagtagagagaatttttcctgggcatcccagctatcctgcaaaagtt
gtatgggatggtggaagaggttatattgcgtgcttgtgccgaaaccattcaggaacatct
gatgctgttgatattctgtacatttgggatgtaaagacaggtgctcgagagcgagtcctt
cgaggaacaccatctcattcaatgtttgaccatttctgtaaaggcatcagcatgaattcc
atttctggaagtgtattgaatgggaatacctcagtttcctcattacttcttccagtaatt
gaagatgggatctctactcactctcatccgaataattcagaaaaattgggcacttcaaca
aatttggtgcctggtactatggttgagtccaatacttccagaactagtaaaggtgattct
gaaaaactatttccagcccctgcggcgacccttcaaagcaacaagcatccaatcaagtcc
tattgccctttccctggaattgctgctctgagttttgaccttgcatcattagtgtttcct
tatcggaagcatgacctgatagcaagtggcagtgataataaacaggataactatgtgaag
ggacagggatctgagacatcaagtccccaccacaagcctttaggtaatggacctggtgtg
cataggacctcgaatgcgattgttgaagagattgaatggattaagacgcttgaagaatgt
ttacttcgatttagcttggcatctttacacttgtggaatgtagatcccgagcttgataac
ttgcttataactgacatgaagttgaagagacccgaaagctttattgtagcttctggtttt
caaggcgacaaagggtctttgacgttgacatttcctaatttgagtgcaactcttgagctt
tggagaatgtcatcagagttttgtgcaatgaggtcactcacaatggtgtctcttgcccaa
tgcatgattagcctatcacacaccagttccaatgccagcagtgctttagcagcattttat
actaggaactttgcagacaaaattccagatataaaaccacccttacttcagcttttggtg
agtttctggcaagatgaaagcgaacatgtacgtatggctgcacgctctctattccactgt
gctgcttcacgggcgattccacttccactatgtaatcaaaaagcaagtggtcgcacaaat
ctgagctctctaagcggacttggagaaaatgaacaagtaaattcaaacatagaagaaaca
tctgctaacattttgcattctgaccagctggcagaaacacaaaggatttctaaggttgaa
gaatttaatattcttgcatggctacaatcatttgagatgcaagactggatttcttgtgtt
ggggggacaagccaagacgcgatgacatctcatattattgttgcagcagctttggctatt
tggtacccaagtcttgtaaagccatgtcttgccatgcttgttgttcatccattaatgaag
ctggttatggccatgaatgagaaatatagttcaactgcagcagagctccttgctgaaggt
atggagagtacgtggaaacaatgcatcagttctgaaatacctcgtctgattggggatata
tttttccagatagagtgtgtaagtggtccatctgtcaactcggctgcccaaagtttagct
gtaccggttggccttcgggagatattggttggtgttcttcttccaagtttagctgtggct
gatgtcccagggtttttaactgttatggaaagccaaatctggtctactgcatctgattca
cctgttcatctagtatctcttatgactctgatcagggttgtccgcggttctccaagatac
ttggctcaataccttgataaggtaattgacttcattttacaaactgtggatcccagcaac
tcagtcatgcgtaaaacttgctttcaaagttcaatgactgcattaaaggaagttgtacgt
gcattccccatggtagccctgaatgatacatggaccagattggctgttggggatgtcatt
ggagagagaaacaatgctaccattcgggtctatgacatgcaaagtgttatgaagataaaa
gttttggatgcaagtggacctcccggacttccaaatttacttgcagccggttcagaaatg
atgctagttactgcaatttcagctttgagcttttcccctgatggagaggggctggttgct
ttctctgagcatggattgatgatcagatggtggtcactgggatctgtattttgggagaaa
ctgagtcgaaacttagttcctgtccagtgcacaaaattgatctttgttcctccttgggag
ggattctctcctaattcttctaggtcaagcataatggcaagcattatgggacacgatagg
caaatcaatattcaggaaggcacaaagggtttgagtcaggctgacaatttgaaactgttg
attcataatcttgacctctcctatcggctagaatgggttggtaaacggaaagtacttctt
acgaggcatggccatgacttgggaactttcccgttgtga
DBGET
integrated database retrieval system
