Prunus mume (Japanese apricot): 103337885
Help
Entry
103337885 CDS
T03196
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103337885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103337885
03036 Chromosome and associated proteins [BR:
pmum03036
]
103337885
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103337885
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103337885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
103337885
NCBI-ProteinID:
XP_008239275
LinkDB
All DBs
Position
LG7:11549684..11557241
Genome browser
AA seq
1004 aa
AA seq
DB search
MFGSTNPAFGQSSSSPFASQPVFGQTSNTSNNPFVPKPFGSSTPFGAQTGSSIFGGTSTG
VFGAAQSTPPFPSSTTFGASSSPAFGNTTPAFGAASSPAFNSSPSPFGGSSGFGQKPVFG
AFGSNTTQPSPFGSTTQPSQPAFGSGIFGSTTPFGGSSQPAFGATSTPPAFGATSSPAFG
ATTTPAFGATTTPAFGATSTPAFGATSNPPAFGATSTPPAFGATSSPAFGSTTSPTFGST
GSAFGVSNSSVFGSTGAFGASSTPAFGSSGSTFGTSSNPGFGASSAPGFGSSSTPSFSFT
SAPAFGQSNSTFGSSSSPFGAQSSPFGTQPTPLGNNTFGQSAFGGQQRGGSRVAAYTETP
EPDGGSGATAAKLESISAMPVYKDKSHEELRWEDYQLGDKGGPAPAGGSGFGMSTAQPNS
LNTASSFPQASTSPFNTATGPNLFTPKTPSFPSTGFGTSSTPFSSSSFGLSTSTNIFTPS
SSPSGFGQTSSQSLFTSSAPSTFSFSAPAQTSNSTFNTGIFNSTAPVAQTGSTFGLSTTS
FGQNTAPFGQSNTFNTPSTGYGLGSSSTASATSNLMGFSQPAPSFPQPFQSSQTPQNNGF
GFNSFNQTQPGNTGGLGGSVGILGQNNFGQLSATQSSAAVQPVPATNPFGTLPAMPQMSI
GRGGTAPSIQYGISSMPVVDKLAPARMSSSLVTSRHLTQRRVRLPVRKYYPKNDDQRFPF
FIDDEETVNTPKADALFLPRENPRSLVIRPKEQWPLRASAEKASPLKDTSTPVHENETPH
EDSIVKERVNHVKANQKPNGVHDDHSIQKGDSYMTLSGHRAGEAAIVYEHGADIEALMPK
LRRSDYYTEPRIQELAAKERAEPGFCCHVMNFVVGRVDYGSIKFFGETDVRRLDLESVVQ
FNNREVIVYMDDNKKPPVGQGLNKPAEVTLLNVTCMDKKTGRRFTEGPKTEKYKQMLKKK
AEDQGAEFVSYDPLKGEWKFKVSHFSKYKLGDEDDWDVDGAQDC
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttctactaacccagcttttgggcagtcatctagcagcccgtttgcatcccaa
ccggtctttgggcagaccagcaacacaagtaacaatccttttgttcccaagccttttggt
agctcaactccgtttggtgcccaaacagggagttccatatttggcggcacttcaactggt
gtatttggtgcagctcaatctactccaccttttccttcctcaacgaccttcggtgcttca
tcctcaccagcttttggaaatacaactcctgcttttggagcagcttctagtccggctttc
aatagttcaccatcaccttttggtggttcatctggttttggtcagaagcctgtttttgga
gcatttggttccaatactactcaaccaagtccttttggaagcacaactcagccatcacag
cccgcatttgggagcggtatatttggttccaccacaccatttggtggatcaagtcagcca
gccttcggggctactagcactcccccagcctttggggctacaagtagtccagcgtttggt
gctacgaccaccccagcgtttggtgctacgaccaccccagcatttggtgctacaagcacc
ccagcctttggggctactagcaaccccccagcctttggggctactagcacccccccagcc
tttggggctacaagcagtccagcctttggttccacaacaagtcctacgtttggaagcaca
ggatctgcattcggggtgtcaaattcctccgtgtttggatctacgggagcctttggggct
tcaagcaccccagcttttggttcatctggatccacttttggtacttcaagcaatccaggt
tttggtgcgtcaagtgctcctggttttggttcatccagtactccatctttcagctttaca
tcagctcctgcttttggccaatcaaattctacatttggtagttcttcatctccatttgga
gcacagagttctccattcggaactcagccaacgccattggggaacaatacctttgggcag
tcagcttttgggggccaacaacgtgggggtagtagagtggctgcatatactgaaactcct
gaaccagatggtggtagtggggctactgctgcaaaattggagtcaatatcagcaatgcca
gtatataaagacaaaagtcacgaagaacttcgctgggaggattatcaattgggggataaa
ggtggtccagctcctgcgggtgggagtggctttggcatgtctacggcacaaccaaactct
ttgaatactgcgtcatcatttcctcaagcatctacaagtccttttaataccgcaactgga
cctaatttgtttactccaaaaactccatccttcccttctacaggctttggaacatcgtct
acaccattcagttcatcatcttttgggctttctacttcaaccaatatttttaccccatca
tcatctccttcgggttttggacaaacctcatctcaatctctctttacttcatcagcgcca
tccacattttcattttctgctccagctcaaacatcaaattccacatttaatacgggaata
ttcaattccactgctccagttgcacagacaggtagtacttttggactaagtaccacttcg
tttgggcagaacacagccccatttggtcagtcaaatacattcaatactccctctactggc
tatggtttggggagctcctctactgctagtgctacaagcaacctgatgggttttagtcaa
ccggctccttcttttccccagcctttccagtcatctcagactcctcagaacaatgggttt
ggattcaacagttttaatcaaactcagccaggcaatacaggtggcttgggtggttcagtg
ggaattcttgggcagaataactttggacaattgtctgctactcaaagctctgcagctgta
caaccagtacctgctaccaatccatttggaacgctccctgcaatgcctcagatgtcaatt
ggtcgtggtggaactgcaccatcaattcaatatgggatttcaagcatgcctgttgtagac
aaactggcgcctgctagaatgtcatcatctttagtgacttctcgacacctgactcaaagg
cgggtcagattgcctgtgagaaaatattatcctaagaatgatgatcaaaggttccctttc
tttattgatgatgaagaaacagtcaatacccccaaggcggatgctcttttccttcccagg
gaaaacccaagatccctcgtcattcgtcccaaagaacagtggcctctaagggccagtgct
gagaaagcatccccattaaaggatacttctactccggtgcatgagaatgaaactccacat
gaagatagcattgtcaaggagcgtgtgaatcatgttaaagccaaccagaaacctaacgga
gtccatgatgatcattctattcagaaaggggactcatatatgacactgagtgggcataga
gccggtgaggctgctattgtatatgagcatggcgctgacattgaagcactaatgccaaag
ctccggcgctctgactactatacagagcctcgaatccaggaactggcggcaaaggaaagg
gcagaacctgggttctgctgtcacgtcatgaactttgtggtcggacgagttgactatggt
agcatcaagttctttggtgagacagatgtgagacgccttgatctggaatctgtggtgcag
tttaacaatcgggaggtgatagtgtacatggatgacaacaagaaacctcctgttgggcaa
ggcctcaataaacctgctgaggtaactcttctcaacgttacatgcatggacaaaaaaaca
gggcgccggtttacagaagggccaaaaactgaaaaatacaagcagatgttgaagaagaaa
gcggaggatcaaggtgccgagtttgtctcttatgaccccttgaaaggagagtggaagttc
aaagtaagccacttcagtaagtacaagttgggagatgaagacgactgggatgtggatggt
gcccaagattgctga
DBGET
integrated database retrieval system
