Prunus mume (Japanese apricot): 103337974
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Entry
103337974 CDS
T03196
Name
(RefSeq) probable pectate lyase 18 precursor
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00040
Pentose and glucuronate interconversions
pmum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103337974
Enzymes [BR:
pmum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103337974
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
103337974
NCBI-ProteinID:
NP_001280201
UniProt:
Q2Z1Y4
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Position
LG7:12187263..12189404
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AA seq
413 aa
AA seq
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MARPSSGPSPLSLLSFLLFSLLTPTLIASRPLQQNPELVVQDVQRSINDSVSRRNLGYLS
CGTGNPIDDCWRCDPNWEQNRERLADCAIGFGKNAVGGRDGKIYVVTDSGDSDPVNPKPG
TLRHAVIQDEPLWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITIQFVTNII
IHGLHIHDCKQGGNAMVRSSPEHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCKDGLVDA
IHGSTAITISNNYMTHHDKVMLLGHSDSYTEDKNMQVTIAFNHFGEGLVQRMPRCRHGYF
HVVNNDYTHWEMYAIGGSANPTINSQGNRFAAPDIRFSKEVTKHEDAPESEWRNWNWRSE
GDLMINGAFFTASGAGASSSYARASSLGAKPSSLVGSITTASGALSCRKGSRC
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggccctcctcaggcccctcacctctctctctcctcagcttcctcctcttctct
ctcctcaccccaaccctcattgcctccagaccattgcagcaaaaccctgaattggttgta
caagatgtacaacggagcatcaatgactctgtttctaggaggaacttgggctacttgtca
tgtgggactggaaaccccattgatgattgctggcgatgtgacccaaattgggagcagaac
agggagaggctggcagattgcgcaattgggtttgggaaaaatgccgttggtggaagagat
ggcaagatttacgtggtcacggattcaggggatagcgaccctgtaaacccaaagccaggg
actctacgacatgccgttattcaggacgagccactgtggatcatcttccagcgtgacatg
acaatccaactgaaggaagagctgatcatgaactctttcaagaccatcgacggtcgagga
gccagcgtgcacattgctggtgggccatgcatcaccatccaatttgtgaccaacattatc
attcatggtctgcacatacacgattgcaagcagggagggaatgctatggtgcggtcctcc
ccagagcactacgggtggaggactatatccgacggtgatggcgtgtccatcttcggtggg
agccacgtgtgggtggatcattgctctttgtcaaattgcaaagatgggttggttgatgca
attcatgggtccactgccataacaatttctaacaattacatgactcaccatgacaaagtg
atgttgcttgggcatagcgattcttataccgaagataagaacatgcaagtcaccattgcc
ttcaatcactttggagaagggttggtccagcgaatgccaagatgtaggcatggatatttc
catgtggtgaacaatgactacacccattgggagatgtatgccattggaggcagtgccaac
cctacaatcaatagccaagggaatagatttgctgcaccagatatcagatttagcaaagag
gtgacaaaacatgaggatgcaccagaaagtgagtggaggaattggaattggaggtctgaa
ggagacttgatgataaatggtgcattttttacagcatcaggagctggagcttcctcaagc
tatgcaagggcttcaagcttgggggcaaagccatcttctctagtgggttcaataaccaca
gcttctggtgcacttagctgcagaaagggttctcgttgctga
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