Prunus mume (Japanese apricot): 103338013
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Entry
103338013 CDS
T03196
Name
(RefSeq) elongator complex protein 3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmum03016
]
103338013
Enzymes [BR:
pmum01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
103338013
Transfer RNA biogenesis [BR:
pmum03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
103338013
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_7
Acetyltransf_10
Acetyltransf_1
FR47
Motif
Other DBs
NCBI-GeneID:
103338013
NCBI-ProteinID:
XP_008239412
UniProt:
A0ABM0PGS8
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Position
LG7:complement(12445995..12449484)
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AA seq
566 aa
AA seq
DB search
MATEVLAVSEPTRKQPRPGRGGFEAHGLSEEEARVRAIAEIVSAMVDLSRKGQNVDLNAL
KTTACRKYGLSRAPKLVEMIAALPESDREALLPKLRAKPVRTASGIAVVAVMSKPHRCPH
IATTGNICVYCPGGPDSDFEYSTQSYTGYEPTSMRAIRARYNPYVQARGRIDQLKRLGHS
VDKVEFILMGGTFMSLPADYRDYFIRNLHDALSGHTSANVEEAVAYSEHGATKCIGMTIE
TRPDYCLGPHLRQMLSYGCTRLEIGVQSTYEDVARDTNRGHTVAAVADCFCLAKDAGFKV
VAHMMPDLPNVGVERDMESFREFFESPLFRADGLKIYPTLVIRGTGLYELWKTGRYRNYP
PEQLVDIVARILAMVPPWTRVYRVQRDIPMPLVTSGVEKGNLRELALARMEDLGLKCRDV
RTREAGIQDIHHKIKPDQVELVRRDYMANEGWETFLSYEDTRQDILVGLLRLRKCGRNTS
CPELMGKCSIVRELHVYGTAVPVHGRDADKLQHQGYGTLLMEEAERIASREHRSTKIAVI
SGVGTRHYYRKLGYELEGPYMVKHLV
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgaagtgttagccgtatccgagcccaccagaaagcaaccccgaccgggtcgg
ggagggttcgaagcccatggactatccgaagaagaggcccgggtccgagcaattgccgaa
attgtgagcgccatggtcgacctctcccggaaaggccaaaacgtcgacctaaacgcgctg
aagactaccgcctgccggaagtacggcctctcacgtgcgccgaagctggtcgaaatgatc
gcggctctgcccgagtcggaccgggaggctcttctcccgaagctccgtgccaagccggtt
cgaaccgcctcgggcatcgccgtcgtggccgtgatgtcgaaacctcaccgctgcccccac
atcgccaccaccgggaatatatgcgtgtattgcccaggtgggccagactcggacttcgag
tacagcactcagtcttacactggctacgagcccactagcatgcgcgcaattcgggccaga
tacaatccatatgtccaggctaggggcaggatagatcaactaaagcgactgggccacagt
gtagacaaggttgagttcatcttaatgggcggtacgttcatgtcgttgccagcagattac
cgtgattactttattagaaatctgcatgacgcattatcaggacacacttctgccaatgtt
gaagaggcagttgcctactctgagcatggtgctactaaatgtattggaatgaccattgaa
acgaggccagattattgccttggacctcacttgagacaaatgctttcttatggttgtacg
agactggagattggagttcaaagtacatatgaggatgtggctcgtgacaccaatagaggt
catacagtagctgcagtggctgattgtttttgcctggcaaaggatgctggtttcaaggtc
gtcgcccatatgatgcctgatctaccaaatgtaggggttgagagagacatggagagtttt
cgggagttttttgagagccctttgttcagagcagatgggcttaaaatttatccaacactt
gtgatccgtggaactggactttatgagctttggaaaactggcaggtatagaaattaccca
cctgagcaacttgtggacattgtagcaaggatcctagccatggttcctccttggacacgt
gtgtatagagttcagcgagacattccaatgcctctagttacttccggggttgagaaagga
aatcttcgggagttggctttagctcggatggaagacttgggcttgaagtgccgtgatgtt
cgaacacgagaggctggaattcaggacatacatcacaaaattaagccagaccaagtggag
cttgttcgtcgtgattatatggcaaatgaaggatgggaaacatttctttcatatgaagat
actcgccaggatattctggttgggttgctgcgactgagaaagtgtggccggaatacgtct
tgtcccgaactcatggggaagtgctctattgttcgtgaactccatgtttatggaactgct
gtcccagttcatgggcgggatgctgacaagctgcaacatcagggctatgggacacttttg
atggaggaggccgagcggatcgcgagcagggagcatagatccacaaagatcgctgttatt
tcgggcgtaggaactcgtcattactataggaaattaggctatgagcttgaaggaccttat
atggtgaaacaccttgtatga
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