Prunus mume (Japanese apricot): 103338112
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Entry
103338112 CDS
T03196
Name
(RefSeq) RNA pseudouridine synthase 7
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmum03016
]
103338112
Enzymes [BR:
pmum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
103338112
Transfer RNA biogenesis [BR:
pmum03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103338112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-GeneID:
103338112
NCBI-ProteinID:
XP_008239520
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All DBs
Position
LG7:12999253..13002749
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AA seq
370 aa
AA seq
DB search
MKRKLEEEDMEIVWQTPANPPHRLDYIFRNGRRHVRPYYFEFIAHVKNRWAGKTIVDLFT
DEFKGRSHDYYVSAVKCGRIRVDGEMVPVSYIVKTSEKISHFLHRHEPPVLTSDVLILQK
EPDVVTVCKPASIPVHPCGQYRKNTVVGILEAEHGLAPLFPVHRLDRLVSGLLILARSAS
KADFFRQQIEGGMIKKQYIARVAGEFPEQEQVVDANINHNAREQRSTAEVGACGDTTPIK
GKTACTKFTRLSTNGVHSLVLCEPVTGRTHQIRVHLQHAGYPIANDLLYLSKHVHDRSAS
IPASDFCENLSTEHVDSNEDFSIDPMCTNCPDLVPKGYDVHEEALWLHCVRYSAPGWTYE
CPYPDWASLS
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaagttggaagaagaggacatggagatcgtctggcaaaccccagccaaccct
ccacaccgactagattacatctttcgcaacgggaggcgccatgtgagaccctactacttc
gagttcatcgctcatgttaagaatcgctgggcggggaagaccatcgttgacttgttcact
gatgagtttaaaggccggtctcatgattactatgttagtgcagtgaaatgtggaaggata
cgagttgatggagagatggtgccagtttcctacatagttaaaacgtcagagaagataagc
cacttcctgcacaggcatgaaccaccagtgttgacttcggatgtgttgattctccaaaaa
gaacccgatgtggttaccgtttgtaaacctgcatctattccggtgcatccgtgtggtcaa
tatcgtaagaataccgttgttggcatccttgaggcggagcatggcttggcacctctattt
ccggtccatcgattagatcgtcttgtctcaggactccttatcttggccagaagtgcttca
aaagctgacttttttaggcaacagattgagggagggatgatcaagaaacagtacattgca
agagttgctggggaatttcctgagcaagagcaagttgtagatgctaacataaatcataat
gctcgagaacaaaggagcacagcagaggttggtgcttgtggtgatactactcccataaag
gggaagactgcttgtacaaagtttactagactcagtactaatggagttcatagccttgtc
ttgtgtgaaccggtcactggccgaactcatcagatacgtgtacatttgcaacatgcaggc
tatccaatagccaatgacttgctttacctgtccaaacatgttcatgatcgctcagcatcg
atcccggcatccgatttttgcgaaaatttatccaccgaacatgtagattccaatgaagat
ttcagcatcgatcccatgtgtacaaattgtcctgatttggttccaaaaggatacgatgtt
catgaagaggctctgtggctacactgtgttcgatattctgcacctggatggacttatgaa
tgcccatatccggattgggcatcactcagctag
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