Prunus mume (Japanese apricot): 103338239
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Entry
103338239 CDS
T03196
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ORTHRUS 2
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmum04121
]
103338239
03036 Chromosome and associated proteins [BR:
pmum03036
]
103338239
Enzymes [BR:
pmum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103338239
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103338239
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
103338239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAD_SRA
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-C3HC4_4
PHD
Anillin_N
RING_XB3-XBAT31
zf-RING_5
Prok-RING_1
zf-RING_10
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
103338239
NCBI-ProteinID:
XP_016651086
LinkDB
All DBs
Position
LG7:complement(13298702..13304735)
Genome browser
AA seq
814 aa
AA seq
DB search
MAYVSHLPCDGDGVCMLCKRKPSDEDKLTCKTCVTPWHVACLVTRPESLASTLQWECPDC
TTFSGESPAAPAVNSAGSGELVAAIRAIENDESLTEQEKAKKRQELLSGKAEVDEEDGGR
QKGGRDVLDVLDKIFYCCFCMQLPERPVTTPCGHNFCLKCFQKWVGQGKRTCAKCRNAIP
PKMASQPRINSSLVVAIRMAKVSKSNVTGGPAKIYQFIQNQDRPDKAYTTDRAQKTGKAN
AASGKIFSWEDRLECRQWGVHFPHVSGIAGQSNHGAQSVVLSGGYLDDEDHGEWFLYTGS
GGRDLSGNKRTNKEQSFDQTFDKYNKALQVSCLKGYPVRVVRSHKEKRSSYAPEKGVRYD
GCYRIEKCWKKVGVQGFKVCRYLFVRCDNEPAPWTSDEHGDRPRPLPPIPELKKATDITE
RKQSPSWDFDEKDGRWTWKKPAPVSKKPVQALNLDDRKRSRKAIRKAHNTTVRDRLLKEF
SCQICRQVMTSPITTPCAHNFCKLCLEGAFAGKSFVRERNRGGRSLRSQKNVMNCPSCPT
DISDFLQNPQVNREIMDMIESLKSTNEEEQNVDPPEESSEEGMADSDNEASTQMSEGKVV
NDGGQNSPSTHKSTRSPKRVKFDLGDCSTKTDDGELNEXKLGNPKESNKSVAPVAKHGRK
AAGQEALEEEAMGDDEGNGSPSSPLQVQSDEDPQESNKSEAPVAKRGRKAAGQAGVGAKT
RGRKKAPEEEALEDDEGNGSPSSPLQVKSVEDAKESKKSVAPVANRGKKAAVQGSVAERT
RGRKKAQEEEALGDDEGNVSPSSPLHVKTDDDFE
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacgttagccatctgccgtgcgacggcgacggcgtctgcatgctctgcaagagg
aaaccgtcggacgaggacaagctcacctgcaagacctgcgtcacgccctggcacgtggcc
tgcctcgtgacccgacccgaaagcctggcatccactctccagtgggagtgcccagactgc
acgacgttctccggcgaatctccggccgctcccgccgtgaactccgccggctccggcgag
ttggtcgcggcgatccgggcgatcgaaaatgacgagtcgttgacggagcaggagaaggcg
aagaagcgacaggagctgttgagcggcaaagctgaagtggacgaagaagacggaggtcgt
cagaagggagggagggacgtcttggatgttctggataaaattttctactgttgcttctgc
atgcagctaccggagagacctgttacgacaccatgcggacacaatttctgcctgaagtgc
ttccagaaatgggttggacaagggaagcgtacttgtgcaaagtgccgcaatgccattcct
cccaaaatggcaagtcaaccccgcatcaactcttcacttgtagttgccatccgtatggct
aaggtgtcaaaatcaaatgttactgggggtcctgctaagatttatcagtttatacaaaac
caagacaggcctgacaaagcctacactacagaccgggctcagaagactggaaaagcaaat
gctgccagtggcaagatatttagttgggaggataggctggaatgtagacaatggggtgta
cactttccccatgtttctggtatagctggacagtctaatcatggtgcacagtcagttgtg
ctttcaggtgggtaccttgatgatgaggatcatggagagtggttcttatacactggaagt
ggtggaagggatttgagtgggaataagcgaacaaacaaggaacagtcttttgaccagaca
tttgacaaatataacaaggctctccaagttagttgcttgaaaggttatcctgttcgagtg
gtaaggtctcacaaggagaagcgctcctcttatgcccctgagaaaggtgtgcggtatgat
ggatgctacagaatagaaaaatgttggaaaaaggttggagttcaggggttcaaggtctgc
cggtatctttttgtcagatgtgacaatgaacctgcaccatggacgagtgatgaacatggg
gatcgacctagacccttacctcctattcccgagctgaagaaagccacagatataacagag
aggaagcaaagtccatcttgggactttgatgagaaagatggccgctggacatggaaaaag
ccagcgcctgtcagcaaaaagcctgttcaagcattaaatcttgatgatcgaaagaggtca
aggaaagcaatcaggaaagcacacaacactactgtccgagataggctcttgaaagaattc
agctgccaaatttgccggcaggtgatgacttcaccaataaccacaccttgtgctcataac
ttttgcaagttgtgtttagaaggtgcttttgctggtaagagttttgtcagagaaagaaac
agaggtgggcggtctcttcgatctcaaaagaatgtcatgaactgcccttcttgtcccacc
gacatctctgattttcttcaaaatcctcaggtgaatagagagataatggatatgattgag
tctctaaaatctacaaatgaagaggagcagaatgtggatccacctgaggagtcaagtgaa
gaaggaatggctgattctgacaatgaagctagcactcagatgtctgaaggaaaagtcgtt
aatgatggcgggcagaattctccttcaacccacaagtccacaaggagccccaaacgtgta
aaatttgatctcggtgattgctcaacaaagacggatgatggggagttaaatgaannaaag
ctgggaaatcctaaagagagcaacaagtcagtggctccagttgcaaagcatgggaggaaa
gctgctggtcaggaggccctggaagaggaagcaatgggagatgatgaaggaaatggttca
ccatcaagtcctctgcaggtgcaatctgatgaggatccacaagagagcaataagtcggag
gctccagttgccaagcgtgggaggaaagctgctggtcaggctggtgttggagcaaagacc
agaggaaggaagaaggctccggaggaggaagcattggaagatgatgaaggaaatggttca
ccatcaagtcctctgcaagtgaaatctgttgaggatgcaaaggagagcaaaaagtcagtg
gctccggttgcgaatcgtgggaagaaagctgcggttcaaggcagtgttgcagagaggacc
cgagggaggaagaaggctcaggaggaggaagcattgggtgatgatgaaggaaatgtttca
ccatcaagtcctctgcatgtgaaaactgacgatgattttgaatga
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