Prunus mume (Japanese apricot): 103338296
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Entry
103338296 CDS
T03196
Name
(RefSeq) 26S protease regulatory subunit 6B homolog
KO
K03063
26S proteasome regulatory subunit T3
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
103338296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pmum03051
]
103338296
Proteasome [BR:
pmum03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
103338296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_16
AAA_5
AAA_lid_3
AAA_2
AAA_22
DUF815
nSTAND3
RuvB_N
AAA_28
NPHP3_N
TIP49
RNA_helicase
AAA_14
Mg_chelatase
Sigma54_activat
IstB_IS21
AAA_24
TsaE
AAA_7
AAA_18
Parvo_NS1
AAA_30
NTPase_1
AAA_11
DUF5906
AAA_3
DUF3450
NACHT
ATPase_2
AAA_33
NB-ARC
AAA_25
ATPase
ABC_tran
DUF6570
AAA_19
AAA_17
Motif
Other DBs
NCBI-GeneID:
103338296
NCBI-ProteinID:
XP_008239747
LinkDB
All DBs
Position
LG1:1449487..1453974
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AA seq
420 aa
AA seq
DB search
MAGSAMVLDPKPLPEPPASFPSIRSDLQASSEQHQASDEDDLYSRLKSLQRQLEFIDIQE
EYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILST
INRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYSDIGGCDIQKQEIR
EAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQK
YLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDG
FDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEV
DLEDYVSRPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKGYQINVKKPDTDFEFYK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcaggctccgccatggtgttggacccgaaacccttaccggagccaccggcttcgttc
ccctccattagatcggacctccaggcttcgtcggagcagcaccaggcctccgacgaggac
gatctctacagccgcctcaaatcccttcagcggcaactcgagttcatcgacatccaggag
gagtatgtcaaggatgagcagaagaacctgaagcgcgagctccttcgtgcccaagaagag
gtcaagaggatccagtcggtgcccctcgtcatcggccagtttatggagatggtcgatcag
aacaatgggattgtgggctccaccactggctccaattactatgttaggattctcagcacc
attaatcgggagcttctcaagccttctgcttcggtcgccttacatcgccactccaatgcc
cttgtcgacgttctgcctccggaggccgactccagcatttcgctccttagccagtctgag
aagcccgacgtcacctattctgatattggaggatgcgatattcagaagcaagaaatccgt
gaagcagtagaactgccacttactcaccatgagttatacaaacagattggaatagaccct
ccacgtggcgtattgctctatggtccacctggaactggtaaaaccatgttagcaaaggct
gttgctaatcatacaactgctgccttcattagagttgttggttcagaatttgttcagaag
tatttgggtgagggtccacgaatggttcgtgatgttttccgtcttgccaaggagaatgca
cctgcaatcatttttattgacgaggtggatgctattgctaccgctaggtttgatgctcaa
actggagctgacagagaagtacagagaatccttatggagctcctcaatcagatggatggt
ttcgaccagacggtaaatgttaaggtcataatggcgactaatcgagcagacacattggat
cctgcacttcttcgtcctggaaggcttgataggaagattgaatttcctttgcctgatagg
aggcagaaaagacttgtttttcaggtttgcactgctaaaatgaacctgggtgatgaggtg
gacttggaagattatgtatctcggccagataaaatcagtgctgctgagatttcagctata
tgtcaagaagcgggaatgcatgcagttcgcaagaaccggtacgtcatactcccgaaggac
tttgagaagggttaccaaatcaatgtgaagaagcccgacactgactttgaattctacaaa
tga
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