Prunus mume (Japanese apricot): 103338325
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Entry
103338325 CDS
T03196
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 16
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103338325
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmum04040
]
103338325
Ion channels [BR:
pmum04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103338325
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
OppC_N
UBM
DUF3974
Motif
Other DBs
NCBI-GeneID:
103338325
NCBI-ProteinID:
XP_008239741
UniProt:
A0ABM0PHL5
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All DBs
Position
LG7:13832070..13835414
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AA seq
704 aa
AA seq
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MVNTFHPYAAASARIRNFSTPFSLRKEIPWWYQIQDPGSERVTLWNHIFFVICIMGLFLD
PIYFFLPSIGGSSCMKIDMGLGIIVTFLRTVFDFFYICHVTVKFRTAFIAPGSRVFGRGQ
LVMDPRAIALRYLKSDFSIDLAAALPLPQIMIWFIIPAVKTPTAAHANHTLSLIVLLQYV
PRFIQIFPLNRRITKSTGVVAKTAWSGAAYNLVLFCLIAHIVGSTWYVLSIRRQYECWKG
ECSKEINKTHSPSCKISFLDCSSEGNPERDAWLKITKVAESCDANDDQDFEFGMFAEAFT
NEVAGAVFIEKYFYCLWWGMRNLCSYGQDIETSTSASETSLCILISILGLVLFSHLMSQM
QTYLQSATIRLEEWRVRKRDTEEWMRHRQLPPELQERVRRFVQYKWIATRGVDEKNILEA
LPTDLRRQIQRHLCLALVRRVPFFAQMDDQLLDAICERLESSLNTRNTYIIREGDPVNEM
LFIIRGQLESSTTDGGRTGFFNSITLRAGDFCGEELLTWALMPTSSLNLPCSTRTVKSLT
EVEAFALRAEDLKYVANQFKRLHSKKLQHAFRYYSHQWRTWGACFMQVAWRRFRKRKLAM
ELAKEEEYYYTHVLDQEDLGNSNSESRIGGGSTDYEGRGAERSSSVGNILHNIPLGPAIL
ASKFAANTRRGIQKVASALHHDESSSTMPKKLFKPDEPDFSADT
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggttaacacattccacccttacgccgccgcctccgcccgcatccgcaacttctcgacc
cccttctcgctccggaaggagatcccctggtggtaccagatccaagacccgggatccgaa
cgcgtgaccctctggaaccacatcttcttcgtcatctgcatcatgggcctcttcctcgac
cccatctacttcttcctccccagcatcggcggctcctcctgcatgaaaatcgacatgggc
ctcggcatcatcgtcaccttcctccgcaccgtcttcgacttcttctacatctgccatgtc
accgtcaagttccggactgctttcatcgctcccgggtctcgggttttcgggcgaggccag
ctcgtcatggacccccgggcaatcgccctccgctacctcaaatccgacttctctatcgac
ctcgccgccgcccttcctctcccacagattatgatttggttcataattccagcagtgaaa
accccaacagctgcccatgctaaccataccctttctctgattgttctgcttcaatatgtt
cctagatttattcaaattttcccgctgaaccggcggattactaaaagtactggtgttgta
gccaagactgcttggtcaggggctgcatacaatctcgttctgttttgtctaattgcacat
attgttgggtctacgtggtatgtgttgtccattcgacggcaatatgagtgctggaagggt
gaatgcagcaaggaaattaataaaacacactctccatcctgtaaaatttcgtttcttgat
tgtagcagtgaaggcaaccccgaacgcgatgcttggctcaagatcacaaaggtggcagaa
agttgcgatgctaatgacgaccaagattttgagtttggaatgtttgctgaggctttcact
aacgaggttgctggtgcagtgtttattgaaaaatacttctattgcctctggtggggtatg
agaaatttatgttcatatggacaagatattgagacaagcacttccgccagtgaaacctca
ttatgcattctcatttccattcttggtctcgttctcttctcacatctcatgagccagatg
cagacctatctgcaatctgcaacgattagacttgaagaatggagggttagaaaaagagac
acagaggagtggatgaggcaccgtcaactccctccagaattgcaagaacgtgttcgtcgt
tttgttcaatataagtggattgccacaagaggggtagatgagaaaaacattctggaggct
ttgcctacggatctccgccgtcaaattcaaaggcatttgtgtcttgcccttgtccgccgt
gtaccctttttcgcacaaatggatgatcagcttctggatgccatatgtgaacgcctcgag
tcatccttgaataccaggaacacatacatcatcagggaaggtgatcctgtgaatgagatg
cttttcatcatcagagggcaacttgagagctccacaactgatggtggaaggacagggttc
ttcaactcaataaccctcagagccggtgacttctgcggcgaagagttgcttacatgggcc
ttgatgcctacatcaagcctcaaccttccatgctcaactcgaacggtgaagtctctaaca
gaagtcgaggcatttgcactgagagctgaagatctcaagtatgttgcgaatcaattcaag
cgccttcacagcaagaaactgcagcatgcttttaggtactattcacaccagtggagaaca
tggggggcttgttttatgcaagttgcttggaggaggtttaggaagagaaagttggcaatg
gaattggcaaaggaggaggagtattattacacacatgttttggaccaagaagaccttggc
aacagcaattcagaatcaagaataggaggtggcagtacagattatgagggtagaggtgct
gagagatcatcatcagtgggaaatattctgcataatattccacttgggcctgcaattttg
gcatccaaatttgcggcaaacaccagaagagggattcagaaggtggcatcagcacttcac
cacgatgaaagcagctccaccatgcccaaaaaactgttcaagccagatgagcctgatttt
tcagcagacacttga
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