Prunus mume (Japanese apricot): 103338688
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Entry
103338688 CDS
T03196
Name
(RefSeq) LOW QUALITY PROTEIN: ERAD-associated E3 ubiquitin-protein ligase component HRD3A
KO
K14026
SEL1 protein
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103338688
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GFIT
Motif
Pfam:
Sel1
TPR_2
TPR_1
TPR_14
TPR_CcmH_CycH
TPR_27
Motif
Other DBs
NCBI-GeneID:
103338688
NCBI-ProteinID:
XP_008240143
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Position
LG7:15862092..15866187
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AA seq
654 aa
AA seq
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MNFATRKLIFALLIVSLYPLSLFARPYVLVLSQDDLLNTPNSPDDSPPVDSTQNDSPEWD
EFGDSGSPQSEEELDPGSWRPIFEPDPFRPDLANNPDERYYSTVSKLIKSVSSGAVATGQ
MRKQNKAKAFTYHYFASEGGNMQSKMALAYTYFRQDMFDKAVKLYSELAEAAVNSFLISK
DSPVIEPVRIHNGAEENKEALRKSRGEEDEDFQILEYQAQKGNSAAMYKIGLFYYFGLRG
LRRDHAKALSWFLKALEKGEPRAMELLGEIYARGAGVERNYTKALEWLTLAAKQELYSAY
NGMGYLYVKGYGVEKKNYTKAKEYFEKAADNEDAGGHYNLGVMYLKGIGVKRDVKLACKY
FIVAANAGQPKAFYQLGKMFHTGVGLKKNLPRATVLYKLVAERGPWNSLSRWALESYLKG
DMGKAFFLYSRMAELGYEVAQSNAAWILDKYGERSMCIGESGFCTDAERHQRAHSLWWQA
SEQGNEHAALLIGDAYYYGQGTERDYERAAEAYKHAKSQSNAQAMFNLGYMHEHGQGLPL
DLHLAKRYYDQALEIDPAAKLPVTLALTSLWIRKNYADGFLVHVIDSLPEVYPKVEQWVD
NVLLEEGNATILTLFVCLLTVLYLRERQRRHAVAAPGGMAVPHHPNEHVAPAPL
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgcaactcggaaactcatcttcgctctcctgattgtctctctctaccctctc
tctctcttcgctcggccgtatgttctcgtcctctctcaagacgacctcttaaacaccccc
aactcgcccgacgactcaccgcccgtcgactcgactcaaaatgactcgcccgagtgggat
gagtttggcgactccggctccccacagtccgaggaggagctcgacccgggctcctggcgc
cccatcttcgagcccgacccctttaggcccgacctggccaacaacccggacgaacgctat
tactccaccgtatccaaattaatcaagtccgtcagctccggcgctgtagctacgggccag
atgaggaagcagaacaaagccaaggccttcacgtaccactacttcgcttccgagggtggt
aacatgcagtcgaagatggctctcgcttatacttactttaggcaagatatgtttgataaa
gcagtgaagctttactcggaattagccgaggcagcagtgaatagcttcctaatttcgaag
gactcgccggtgatcgagccagtgaggatccacaatggagctgaggagaacaaggaggca
ttgaggaagagcagaggcgaagaagatgaggactttcagattttggagtaccaagctcag
aagggaaactctgcggcaatgtataagattggactcttttactattttgggctgagaggg
ttgaggcgcgaccatgccaaggcgttgtcgtggtttttgaaagcgttggagaagggagag
cctcgggcgatggagctgcttggggagatttatgctagaggagctggggttgagaggaat
tacaccaaggctctggagtggcttacactcgcagccaaacaggagctttattcagcctat
aacgggatgggctatttgtatgttaaaggatatggggtggagaagaagaactacaccaaa
gcaaaagagtattttgagaaggctgctgataatgaagacgcaggggggcactataaccta
ggagtaatgtatctcaaagggattggggtaaagagagatgtgaaacttgcatgtaaatac
tttatagtggctgctaatgctggtcaacccaaggcattctaccagctgggaaagatgttt
catactggagttgggcttaagaaaaatcttcccagggccactgtattgtacaaactagtt
gcagaaaggggaccgtggaactccttgtccagatgggcactagaatcatacttaaaaggg
gacatgggcaaggcattcttcttgtattcaaggatggctgagttaggctatgaggtagcg
caaagtaatgctgcatggattcttgacaaatatggagaacgtagcatgtgcataggagaa
tccggcttctgcacggatgcagaaaggcatcagcgtgctcattcattgtggtggcaagca
tctgagcagggtaatgaacatgctgctttgctgattggggatgcatattactatggtcag
ggtactgagagagattatgaacgtgcggcagaggcttacaagcatgccaagtcccagtct
aatgcacaagccatgttcaaccttggttacatgcatgagcatggacaagggctgcctttg
gatcttcatctcgcgaagcgttactatgatcaagccctagagattgatccggcagcaaag
ttgcctgtcacattagcccttacaagcttatggatacgaaaaaattatgccgatggtttc
ctggtccatgtgatcgattcattgcctgaagtttatcccaaggtggaacaatgggtagat
aatgtgcttctagaggaaggaaatgcgacaatattgactctttttgtttgtctcctcact
gtcctatatcttcgtgagcgacaacgcaggcatgctgttgctgcccctggtgggatggct
gtgccacaccacccgaatgagcatgttgcaccagcacccttatag
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