Prunus mume (Japanese apricot): 103338729
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Entry
103338729 CDS
T03196
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103338729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103338729
03012 Translation factors [BR:
pmum03012
]
103338729
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
103338729
Translation factors [BR:
pmum03012
]
Eukaryotic type
Release factors
103338729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
EF-G_D2
G-alpha
Motif
Other DBs
NCBI-GeneID:
103338729
NCBI-ProteinID:
XP_016651356
LinkDB
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Position
LG7:16085198..16094018
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AA seq
515 aa
AA seq
DB search
MDIEEEIRSLQLDSAAEDNGVVNPEAAQPEVENSNKMEEDSKEEVHPHSVKPEVVEQKGK
EKINVDPEEEHDEMELDKKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEA
KEKRVRTWYMAYIMDTNEEERVKGKTVEVGRAHFETESSRFTILDAPGHKSYVPNMISGA
SQADVGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLLVVVNKMDDPTVNWAKER
YDEIGSKMVPFLKTSGYNVKKDVQFLPISGLVGTNIKNRVDKTVCSWWDGPCLFEALDAI
EIPLRDPKGPFRMPIIDKFKDMGTVVMGKVESGSVREGDSLFVMPNKVPVKVVAIFIDED
RVKRAGPGENLRVRLSGIEDEDILSGFVLASVANPIPAVTDFFAQLQILELLDNAILTAG
YKAVLHIHSIVEECEIIELISQMDPKTKKPMKKHIRFVKNGAVVVCKIQVNNLICVEKFS
DFPQLGRFTLRTEGKTIAVGKVIDPPSTYSLKLSS
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggatattgaggaggaaatccgatcgttacagcttgattcggcagcagaagataatgga
gttgttaatccagaagctgcacagccggaagttgagaattccaataaaatggaggaagat
tccaaggaagaggttcatccacattcagttaagccagaggtggttgagcagaaagggaag
gagaagataaatgtggatccagaagaagaacatgatgagatggaactagataagaagagg
cacttgaatgttgttttcattggccacgtcgatgctggaaagtccacaactggaggccaa
atacttttccttagtggtcaggttgatgaccgtacaatccaaaaatatgaaaaagaagca
aaggaaaaaagagtaagaacatggtatatggcctatattatggataccaatgaagaagag
agggttaagggtaaaacagttgaagttggacgagcacattttgaaacagagtcatcaaga
tttacgattttggatgcacctggccacaaaagttatgttccaaatatgatcagtggtgca
tctcaagctgatgtaggagtactggttatttctgctcggaaaggagaatttgaaactggg
tatgagaggggtggacagacccgtgagcacgttcagcttgctaaaactttgggtgtgtcc
aaactgcttgttgttgtaaataaaatggatgatcctaccgtgaattgggcaaaagaaaga
tacgatgaaattgggtcaaagatggtgccattccttaaaacatcaggctacaacgtgaaa
aaagatgtccaattcctacctatatctggtctggttggtacaaacataaaaaacagagtg
gataaaacagtatgttcgtggtgggatggtccttgcctgtttgaagcccttgatgccatt
gagattcctctgcgggatcccaaaggtccattcaggatgcctatcatagacaaattcaag
gacatgggaactgttgttatgggcaaagtggaatctggttcggtgcgagagggggattcg
ttgtttgtcatgccaaataaggttccggtgaaagttgttgctatattcattgatgaagat
agggtcaaacgtgcgggacctggtgaaaatctacgggttagattatcgggcattgaggac
gaggatatattgtcaggttttgtcttggccagtgttgcaaatccaattccagcggttaca
gatttttttgcccagttgcagattcttgagttgctggacaatgcaatcttgacggctggc
tacaaagctgtcctgcatattcactcaattgttgaagaatgtgagattattgagctcata
agtcaaatggatccaaagacgaagaaacctatgaaaaagcatattcgttttgtcaagaat
ggcgctgttgttgtgtgcaagattcaggtgaataatttgatatgcgttgagaagttctca
gattttccacaacttggaaggtttactcttcgtactgaaggaaaaactattgcagtggga
aaagtaattgaccctccatcaacttactccctcaaattaagttcttaa
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