Prunus mume (Japanese apricot): 103338749
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Entry
103338749 CDS
T03196
Name
(RefSeq) nuclear poly(A) polymerase 1 isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103338749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmum03019
]
103338749
Enzymes [BR:
pmum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
103338749
Messenger RNA biogenesis [BR:
pmum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
103338749
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
103338749
NCBI-ProteinID:
XP_008240214
UniProt:
A0ABM0PIT3
LinkDB
All DBs
Position
LG7:16177953..16183382
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AA seq
755 aa
AA seq
DB search
MASPGLSNRNNGKRLGITEPISLGGPTEYDVIKTRELEKYLQDARLYESQEEAVSREEVL
GRLDQIVKIWVKTISRAKGLNEQLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHAT
REEDFFGELQRMLSEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYAKLSLWVIPEDLDI
SQDSILQNADEQTVRSLNGCRVTDQILRLVPSIQNFRTTLRCMRLWAKRRGVYSNVAGFL
GGINWALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQVWDPRR
NPKDKYHLMPIITPSYPSMNSSYNVSSSTLRIMLEEFQRGNEICEAMESNKADWDTLFES
YNFFEAYKNYLQIDISAENADDFRKWKGWVESRLRQLTLKIERHTYDMLQCHPHPGDFSD
KSRPFHSSYFMGLQRKQGVPVTEGEQFDIRATVEEFKQSVNRYTLLERGREIRVSHVKRR
NIPNFVFPGEVRPLRPSKVTWGSRRGSELKVSGDAQPDKLCEGKTDLEGSDGGQKRKRVD
DTVETDSRYAKSLHLCSGEVHAASPPISNISSRSTKCESMDANKKVDDSIAVSLEKIENP
ADIPYQNGQIEVSSRCNPPNDSLPAAANTSSFKEAEKMALEKNMAGPYVSHQAFPELDEL
EDDSEYRHQVKDFSRNMKSSQMEPSEESVSVSARVNSSNGAGPSTDSYNGGLEELEPAEL
MVPSSNGIPPEPVAQKKSIIRLNFTSLAKAAGKSS
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtcccggattaagcaaccgaaataacgggaagcgattaggcattacggagccc
atctcgttaggtggaccgacggagtacgatgtgatcaagactcgtgaacttgaaaagtat
ttgcaagatgctagattgtacgagagtcaggaagaggctgtgagtagggaggaggttctt
ggcaggctagaccagattgtgaagatatgggttaaaacaattagccgagcaaagggcttg
aatgagcaactagtgcatgaagcaaatgctaagattttcaccttcggctcatatcggcta
ggggttcatggccctggagcagatatagacacactctgcgttggacctagacatgcaact
cgagaagaagatttctttggcgagctacagaggatgctgtctgagatgcctgaagttaca
gagttgcatcctgtgcctgatgctcacgtcccagttatgaaattcaagttcagtggggtt
tcaatagatcttctttatgcaaaactatcactttgggttattcctgaagacttagacata
tcacaagactcaatactacagaatgcagatgaacagacagttcgtagtctcaatggttgt
agagttacagatcaaattctgcgtttagtgccaagcattcagaatttccgcacaacattg
agatgcatgaggttatgggcaaagcgtcgtggtgtttattcaaatgttgcaggatttctt
ggtggtataaactgggcattgcttgttgctcgcatatgccaactttacccaaatgcactg
cctaatatgctagtgtctcggttcttcagggtgtatactcagtggcgttggccaaatcca
gtcatgctctgtgctattgaagaaggttctcttggacttcaggtttgggatcctagaaga
aatccaaaggacaagtatcatttgatgcctattattactccttcttatcccagcatgaac
tccagctacaatgtgtcctcaagtacgctgcgtatcatgttagaggagtttcagagggga
aatgaaatttgtgaggctatggaatcaaataaggctgattgggacaccctttttgagtct
tataatttctttgaagcatataagaattatttgcagatagacatcagtgcagaaaatgct
gatgactttagaaaatggaaaggctgggttgagtcccgtcttcgccaactaacgctgaag
attgagaggcacacttatgacatgctacagtgtcacccacacccaggtgatttttcagac
aaatccagaccttttcatagctcttacttcatgggcctacaacgaaaacaaggagttccc
gtcactgaaggtgagcaatttgacataagggcaacagtagaggaatttaagcagtctgtc
aaccggtacacattattggagcgtggaagggagatccgtgtatcccatgtaaaacgcagg
aacattcctaattttgtatttcctggtgaggttcgacctttgcgcccgtctaaagtaact
tgggggagcaggcgcggttcagaactgaaggtttctggcgatgctcaaccagataaattg
tgtgaaggtaaaactgatttagagggatcagatggtggacagaagagaaagcgggtggat
gatactgtagagactgactcaaggtatgccaagtctttacatctctgcagtggggaagtt
catgcggctagccctcctatcagcaatatcagttcacgttccacaaaatgtgaaagtatg
gatgcaaacaaaaaggttgatgatagcatagcagttagcttagaaaagatagaaaaccca
gcagatattccttatcagaatggtcagattgaagtatcgtcaaggtgcaatcccccaaac
gatagtctacctgctgctgcgaatacgtcaagttttaaagaagcagagaagatggcatta
gagaagaatatggctggcccatatgtttcacaccaagcttttccagaactggatgagctt
gaagatgattctgaatatagacatcaagttaaagatttttccaggaacatgaaaagcagc
caaatggagccttcagaggagagtgtatcagtttcagcgcgagtaaactcaagcaatgga
gctggtccttccactgattcatataatgggggcttagaggaacttgagccggcggaactt
atggtgccatcttcaaatggaatcccacctgaacctgtggcacagaaaaagtcgatcatc
aggttgaatttcacttcgttggccaaagctgctggtaaaagctcataa
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