Prunus mume (Japanese apricot): 103338887
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Entry
103338887 CDS
T03196
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103338887
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmum04040
]
103338887
Ion channels [BR:
pmum04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103338887
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GFIT
Motif
Pfam:
Ion_trans
DUF6525
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
103338887
NCBI-ProteinID:
XP_008240379
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Position
LG7:complement(16773099..16782148)
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AA seq
783 aa
AA seq
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MAGYEREEVPMLSGTHPQLSDENVHLQFERFTSRTRSASVSIPMDSVDLSYEREASLVSH
TGPLRSQTKTPFLPMSGPLYRRRPDNILRPTQAVPGQEESVEPAGEKFPSTNVTNQNEWT
DDNYAGKNEHLLRSGQLGMCNDPYCTTCPTYNLKAAQPQHSRASGIFDPQFHNALYGDAK
GWARRFFSFLRPYIPGVMNPHAKVVQQWNKFFVISCLVAIFVDPLFFFLLYVQKDNKCIV
LDWPMTTTLVVFRSMTDFIYLMHILLQFRLAYVAPESRVVGAGELVDHPKKIARNYLQGY
FLIDFFVVLPLPQIIILLVLRKNLGLSGANYAKNLLRAAVLLQYIPRLCRCLPLLAGQSP
SGFIFESAWANFIINLLTFVLSGHVVGSCWYLFGLQRVNQCFRDVCHDSGIRGCMSFVDC
GHGNEIAGSKVEDPVRDSWKNYTNANACLDKDGFDYGIYSPAVNLTTENSVITRYVYALF
WGFQQISTLAGNQTPSYFLWEVLFTMAIIGLGLLLFALLIGNMQNFLQALGRRRLEMSLR
RRDVEQWMRHRRLPEELRRRVRQAERYNWAATRGVNEEILLENLPEDLQTDIRRHLFKFI
KKVRIFSLMDEPILDSICGRLRQKIYIKGSKVLYHGGLIEKMVFIVRGKMESIGEDGITV
SLSEGDVCGEELLTWCLEHSSVNRDGKIRIPGQRLLSNRMVRCLTNVEAFSLRAADIEEV
TSLFSRFLRKPRVQGAIRYESPYWRGLAARFIQVAWRYRRKRQSRADTSQSQSQSNHIHN
HAL
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggctggttatgaaagagaagaggtacccatgctatcgggcactcacccacaattatca
gatgaaaatgtgcacttacaatttgagagatttacgtcacgaaccagaagtgcatcagtt
tccattcctatggactctgtggacttgtcatatgaaagggaggctagccttgtaagccat
actggtcccttgaggagtcaaacaaaaactccattcctccctatgagtggtccattatat
agacgcaggcctgataacattttacggccaactcaagctgtaccagggcaagaagaatca
gtcgaacctgcaggagaaaagtttccttctactaatgtgacaaaccagaatgaatggaca
gatgacaactatgctggaaaaaatgaacacttactgagatctgggcaattagggatgtgc
aatgatccttactgcacaacttgcccaacatacaatctcaaggctgctcaaccacaacac
tcaagggcttccggtatatttgatccccagttccataatgctctctatggggatgccaaa
ggctgggcgaggagatttttctcatttctgcgtccatatattcctggagttatgaaccct
catgctaaagtggtgcaacagtggaacaagttttttgtcatttcatgcttagtagcaatt
tttgtagatccattgtttttcttcttgctgtatgttcaaaaggataataaatgcatagtt
cttgattggcccatgacgacaacacttgtggtttttagaagcatgactgattttatatac
ttgatgcacatactccttcagtttagattggcttatgtggctcctgagtctagagtggtt
ggtgctggcgagttggttgaccatccaaagaaaattgctcggaattaccttcaaggatat
tttctaattgacttctttgttgtattaccgcttcctcagatcataattttgttagttcta
cgaaaaaacttgggattatctggtgcaaactatgcaaaaaatttgttacgtgctgcagtt
cttcttcagtacattcccaggttgtgtaggtgtctacccctgcttgctggtcagtctcca
agtggcttcatatttgagtccgcatgggcaaacttcataataaatcttctcacatttgtg
ttgtctggccatgttgttgggtcgtgctggtacctcttcgggttacagagggttaatcaa
tgttttcgagatgtctgtcatgactctggaattcgtgggtgcatgagcttcgtggattgt
gggcatggaaatgagattgcaggttctaaagtggaagatccagtacgtgatagctggaaa
aactatacgaatgctaatgcttgtttagataaagatggttttgattacggaatctacagc
ccagctgtcaatcttacaacagaaaatagtgtaatcacgagatatgtatacgccctgttt
tggggattccagcaaatcagtactctggctggaaatcaaactccaagttattttctttgg
gaagtcctttttacaatggctattattggcctagggctcttgctttttgctcttctcatt
ggaaatatgcagaactttctgcaggctcttggtcggagaaggttagaaatgtctctgaga
cgtcgtgacgttgagcagtggatgagacatagacggttgccagaggaacttagaaggcga
gtacgacaagctgaaaggtacaattgggccgcaaccagaggggtaaatgaagaaatcctt
ttggaaaacttgcctgaagaccttcagacagatataagacgccatctcttcaagtttatt
aagaaagtacgaattttttccctgatggatgaacccatcttggattccatttgtggaaga
ctaagacaaaagatatacatcaaaggaagcaaagttttgtaccatggtggtctaattgag
aaaatggtttttattgtgcggggaaaaatggagagcattggagaagatgggattacagtt
tccttatctgaaggggatgtttgtggtgaggaacttctcacatggtgccttgagcattct
tcagtgaacagagacggtaagatcaggattcctggacagcgattgcttagcaacaggatg
gtgagatgcttaacaaacgtggaagcattttcactccgagctgcagacattgaagaagtc
accagtcttttctccagatttttgcgaaaaccacgtgttcaaggagccataagatatgaa
tcaccttactggagagggcttgcagcaagattcattcaagtagcctggagatacaggaga
aaacgccaaagtcgagcagacacctcacaatcccagtcccaatccaatcatattcataac
catgcattataa
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