Prunus mume (Japanese apricot): 103338959
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Entry
103338959 CDS
T03196
Name
(RefSeq) syntaxin-related protein KNOLLE
KO
K08486
syntaxin 1B/2/3
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
103338959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103338959
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmum04147
]
103338959
Membrane trafficking [BR:
pmum04131
]
SNARE
Syntaxin (Qa)
Stx-PM
103338959
Exosome [BR:
pmum04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
103338959
Exosomal proteins of other body fluids (saliva and urine)
103338959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
LarA_C
Piezo_THU9_anchor
T2SSF
DUF1942
ALIX_LYPXL_bnd
Synaptobrevin
PDR_CDR
STX6_10_61_N
APC1_C
Motif
Other DBs
NCBI-GeneID:
103338959
NCBI-ProteinID:
XP_008240453
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Position
LG8:complement(157694..159157)
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AA seq
316 aa
AA seq
DB search
MNDLMTKSFTNYVDLKKEAMKDLDLEAGHNNVEMSSSTTHMHTDLGLFLEEAEKVKQEMG
SVRDILGRLQQANEESKSLHKSEALQSLRSRINADIMTVLKKTRTIRSQLEDMDRANAAN
RRLSAYKEGTPIYRTRIAVTNGLRKKLKELMMDFQGLRQRMMTEYKETVGRRYFTVTGEH
PDEEVIEKIISNGDGNGGEEFLGKAIQEHGRGKVLETVVEIQDRHDAAKEIEKSLLELHQ
IFLDMAVMVEAQGEQMDDIEHHVMNASHYVKDGTKHLTTAKGYQRSSRKWMCIGVIILLL
LILVIVIPIATSFANS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacctgatgacaaaatccttcaccaactatgtggatctaaagaaagaggctatg
aaagatttggaccttgaagctgggcataataatgtggagatgtcatcttccacgacccat
atgcacaccgaccttggtctgttcttggaagaggccgagaaggtgaagcaggagatgggt
tctgtccgggacattctgggccgtctacagcaagccaacgaagagagcaagtccctccac
aagtctgaggctttgcagtccttgcgcagcagaattaatgcggacattatgacggtgctg
aagaaaaccaggactatcagatctcagctggaggacatggaccgtgccaacgccgccaac
aggaggctctccgcctacaaagaaggcaccccgatttacaggaccagaattgccgtcacc
aacggactgcgaaagaagctcaaggagcttatgatggatttccagggcctgaggcagagg
atgatgaccgagtacaaggagactgtggggagacgctacttcacggtgactggagagcac
ccggatgaggaggttatcgaaaagatcatctcgaatggggatggaaacggcggcgaggag
tttcttgggaaggccatacaagagcatgggaggggaaaggtgctggaaactgtggtggag
atacaggacaggcacgacgcggccaaggagattgagaagagcctgctggagctgcatcag
atattcttagacatggctgtgatggtggaggctcagggagagcagatggatgatattgag
caccatgtcatgaacgcttcccactatgtgaaggatggaaccaaacatctgacgactgcc
aagggataccagaggagcagcaggaagtggatgtgtattggagtcataatcctgctcctg
ctcattcttgtcattgtcatccccattgccactagcttcgctaattcttga
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