Prunus mume (Japanese apricot): 103339124
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Entry
103339124 CDS
T03196
Name
(RefSeq) crossover junction endonuclease MUS81-like isoform X1
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03440
Homologous recombination
pmum03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103339124
03460 Fanconi anemia pathway
103339124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmum03400
]
103339124
DNA repair and recombination proteins [BR:
pmum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
103339124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
Terpene_synth_C
Motif
Other DBs
NCBI-GeneID:
103339124
NCBI-ProteinID:
XP_008240626
UniProt:
A0ABM0PJS8
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Position
LG8:2308312..2316166
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AA seq
487 aa
AA seq
DB search
MQGFSETGSGSSEPEDLSKDYKRTKGSRRYVPQKNSVAYALLITLYRGIGNGNEFMLKQE
LIDAAEASGLSRVPIMPDKGKGKAGRFGSSAREWYSGWSCMKTLVTKGLVIKSSCPAKYM
LSQEGQEAARECLMRSGMENPIEKTANAKVLSVLDVDNISHQELAHPDSSTEMILLSTAV
SRKKKSFDIPQLYIEKSHHVPKSRSDGFKASSNVFSLPPLSFGERFEDAYEVILILDDRE
QFATRGSRPGRIIENVRTQFKIKIEVRRLPVGDGIWIARHKHIESEYVLDFIVERKKVDD
LRCSIRDNRYRDQKLRLMRCGLKKLIYLLEGDPNCSEAAESIKTACFTTEILEGFDVQRT
IGLADTLKKYVYLTQAITQYYKSEYSEEQHRHTGICPSFDEFIKRCEELDKMTVSDVFAI
QLMQVPQVTGEVALAVLDLYPTLLSLARAYSLLEGDVAAQEEMLRTQSNNVVNAGASKNI
FYLVWGN
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcaagggttttccgagaccggttcaggcagctctgaaccagaagacttgtctaaagac
tataagagaaccaaaggaagcagacgctatgttcctcagaagaattctgtagcatatgca
ttgttgattacactttacaggggaattggaaatgggaatgaatttatgcttaaacaggag
cttatcgatgcagctgaagcaagtgggctttctcgtgtgccaattatgccagataaggga
aagggaaaagctggacgctttgggagttctgcaagggagtggtatagtggatggtcctgc
atgaagacattggtaaccaaggggctggttatcaaatcaagttgcccagcaaagtacatg
cttagtcaagaaggtcaggaagctgcacgtgaatgtctcatgaggtccggtatggaaaac
cccattgaaaaaactgctaatgccaaagtgctttctgttctggatgtggacaatatttca
catcaggagcttgctcatcctgattcatccacagaaatgatattgttatccactgctgtg
agtaggaagaagaaatcatttgatattccacagctgtacattgagaagagtcatcatgtg
ccaaagtctagatcagatggtttcaaagcaagttcgaatgtcttttccttgccacctcta
agctttggggagagatttgaagatgcatatgaagtgatcttgattttggatgatcgagag
caatttgccactcggggatcacgacctgggagaataattgagaatgttcgtactcaattc
aaaatcaaaatagaggttaggaggttaccagttggagatggaatctggatagcccgtcat
aaacatattgagagcgaatatgtacttgattttattgttgagaggaagaaagttgatgat
ttacgttgttcaatcagagacaaccgttacagggatcagaaactgagacttatgaggtgt
ggacttaagaaactgatatatcttctggaaggcgatccaaattgttctgaagctgcagaa
agcattaaaacagcctgtttcacaactgaaattttggagggatttgatgttcagagaacc
attggcttggctgatacactgaagaagtatgtttatcttactcaggcaataactcaatac
tacaaatcagagtattctgaggaacaacatagacataccgggatttgcccctcttttgat
gaatttatcaaaaggtgtgaagaactggataaaatgacagtcagcgatgtatttgccatt
cagctcatgcaggtcccccaggtaactggggaagttgccttagctgttctggatttgtac
ccgacgcttttatctcttgcccgtgcctactctctacttgagggtgacgtggctgcacaa
gaggagatgcttagaacacagagcaacaatgttgtcaatgcgggtgctagtaaaaatatt
ttttacttggtttggggcaattga
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