Prunus mume (Japanese apricot): 103339180
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Entry
103339180 CDS
T03196
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmum04131
]
103339180
04121 Ubiquitin system [BR:
pmum04121
]
103339180
Enzymes [BR:
pmum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103339180
Membrane trafficking [BR:
pmum04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
103339180
Ubiquitin system [BR:
pmum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103339180
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
Zn_ribbon_GTF2H2
zf-ANAPC11
Zn_ribbon_RPAB4
Rad50_zn_hook
VPS18_RING_C
DUF7573
Zf_IFT144_1st
Motif
Other DBs
NCBI-GeneID:
103339180
NCBI-ProteinID:
XP_008240686
UniProt:
A0ABM0PJY1
LinkDB
All DBs
Position
LG1:20855040..20856885
Genome browser
AA seq
354 aa
AA seq
DB search
MASLGSASYWCYTCSRSIRVRIRAQDSILCPDCGAGFIEEIQTPTRSPLHHPFPTAAMFL
DNTPISQSPSPPNLRRSQRSSRDRSPFNPVIVLRGPPDTESDPGSFELYYDDGAGLGLRP
LPSSMSDFLMGSGFDRLLHQLTQLENGVARLDHPPASKAAIESMPVIKIADDHVSTESHC
AVCKEAFELDSEAREMPCKHIYHSDCIFPWLSIRNSCPVCRHQLPTDVRGPRGSGRASPE
NNGVVGEEETVGLTIWRLPGGGFAVGRFTGGRRAAERELPVVYTEMDGGFNTAGAPRRIS
WASRRRARESGGFAQAFRNFFSFFGRLRSSRSGSGNVFSRSSRRRSQRWALEDN
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggcttccctgggctccgcctcatactggtgctacacatgtagccgatcgattcgggtt
cggatccgggcccaagactcgatcctctgccccgattgcggcgccggattcatcgaagag
atccagaccccgacccgatctcctctccaccacccattccccaccgccgcgatgttcctc
gacaacactccaatttcgcagagcccgagcccacctaatctccgccggagccagagaagc
agccgcgatcgctcaccgttcaacccggttattgtcctccgaggcccacctgacaccgaa
tccgacccgggaagcttcgagctttactacgatgacggagccggtttgggcctccgccct
ctaccgtcgtccatgtcggacttcttaatgggatcgggtttcgaccggctgctccaccaa
ttgacccaattggaaaacggcgtcgcacggctcgaccaccctccggcgtcgaaagccgcc
atcgagtccatgcccgtcatcaaaatcgctgacgaccacgtctccaccgagtcgcactgc
gctgtttgcaaagaggcgttcgagctcgactcggaagctcgcgagatgccctgtaagcac
atctaccactccgactgtatattcccatggctttcgattcgaaactcgtgcccggtttgc
cgccaccagctccctactgacgtgcgcgggccgcgtggcagtggcagagcctcgccggag
aataatggtgtggttggagaagaagagacggtggggttgactatctggagattgcccggg
ggcggattcgctgtgggcaggttcaccggaggcaggagagctgctgagcgtgagcttcca
gttgtttacactgagatggatggtgggttcaatacggctggtgcccctaggaggatttca
tgggcttctagaagaagagcgagggagagtggtgggtttgctcaggcttttcgcaatttc
ttctccttttttgggaggctcagaagctcgagaagcgggtctggtaatgtgtttagtaga
tcatcaaggaggagaagccagcgttgggctttggaagataactga
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