Prunus mume (Japanese apricot): 103339287
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Entry
103339287 CDS
T03196
Name
(RefSeq) endoribonuclease Dicer homolog 2-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmum03036
]
103339287
Chromosome and associated proteins [BR:
pmum03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103339287
microRNA pathway
RISC loading complex
103339287
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Ortholog
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GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
PAZ
dsrm
Motif
Other DBs
NCBI-GeneID:
103339287
NCBI-ProteinID:
XP_008240779
UniProt:
A0ABM0PK59
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Position
LG8:complement(4608562..4612769)
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AA seq
781 aa
AA seq
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MEPLNREIDGTQQQSAAPLLVEEATQEPGSEPYDDEQPSYVPAELVKPWCSNDASALYHC
YLIEMKPNFCYDIPVNDIVLGMRSELDCDIANMTFDLEVGRGTITVNFKKAAEIHLSSEQ
VLQCRRFQITIFGILLDHELPNLGKVLERLCLGQNLGNESIDYLLLPAARMHQRPSIIDW
ECVTSVSFRCEENSEYHVDCSPPKNCSGALHTKNGMVCTCRIQNSLVYTPHTGLLYCITG
LLDDMNGNSLLRPKGRRARSYKTYYEEKHGIKLRFDQQLLLKGKHIFKVQNYLKSCRLHT
ERDSCHTSVELPPELCSIVMSPLSVSNLYSFSFVPSIMHRLESLLLAVNLKRMVLDRCTE
NVTIPTIKVLEAITTKHCKENLHLESLEALGDSFLKYAASQQLFKTYQNDDEGDLTAKRE
KIISNDALCKFGCDRKLPGFIRNECFDPKSWIIPGDYSGGSFLNEELPFNKRNIYIRGRR
KVKSKRVADVVEALIGAFLSTGGEIAAIHFMNWVGIKVDLVHTPYERHFQVQPEKLIDVR
HLESLLNNYSFRHPHLLLEALTHRSYMLPQIPGCYERLEFLGDAVLDYAITVYLYNKYPG
MSPGVLTDMRSASVNNNCYALSAVKARLHEHILASDNVHSNIANTVNNFERLSMESTFGW
ESDTSFCEVLADIIESLAGAIFVDSEYDKNAVFQSIRPLLEPLVSPETMPLNPVREFHDY
CQKMQYIMKKPVKSIQNGVATRTIEVEANGVVKYTYTSTASNNDTAKRLACKEFLRLSKG
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggaaccacttaacagggagatagatggaacccaacaacaatctgctgctcctcttctt
gtggaagaggcgacacaagagcctgggagtgagccttatgatgatgaacaacccagttat
gtcccagctgagcttgtcaaaccttggtgttcaaatgatgctagtgcattgtatcattgc
tacttaattgagatgaagccgaatttttgttatgatattccagttaatgatatcgtactt
ggcatgaggagcgaacttgattgcgatattgcaaatatgacttttgacttggaagttggc
aggggtactataactgtaaactttaaaaaggccgcagagattcatcttagttcagagcaa
gttcttcaatgcagaaggttccaaatcacaatttttggaattctactggatcacgaattg
ccaaatttgggaaaagttttagagagactttgtttgggacaaaatcttgggaatgaatca
attgattaccttttgctcccagcagcaagaatgcaccagagaccttcgatcattgattgg
gaatgtgtgacgtctgtttcatttcggtgtgaagaaaattctgagtatcatgtagattgt
tctccacccaaaaattgttccggtgctctacataccaaaaacggtatggtttgtacttgc
aggatccagaattccttggtctatacccctcatactggtctcctgtattgcatcactggt
ttgttggatgacatgaatgggaactcacttctgagacctaagggcaggagggctcgtagc
tacaagacgtactatgaagaaaagcatgggatcaagttgcgttttgatcagcagttattg
ctcaaggggaaacacattttcaaagtacaaaattatcttaagagttgcagactacacaca
gaaagagattcatgtcatacatctgttgaattgccgcctgaactttgctctatagtcatg
tcgcctttatcagtcagcaatttatattcattctcctttgttccatccatcatgcatcgt
cttgaatctttacttcttgctgtcaacttgaaaaggatggttttggatcgttgcacagaa
aatgttactattccaaccattaaggtcttggaagctattaccacaaagcattgcaaagag
aacttgcatttggaatccttagaggctcttggagattcatttcttaagtatgctgcaagt
cagcagctttttaaaacctatcaaaatgatgatgagggggatcttacagcaaagagggaa
aaaataatttccaatgatgccctttgcaagtttggctgtgaccgcaaacttccgggcttt
attcgtaacgagtgttttgatccgaaatcgtggattatacccggagattattctggaggc
tctttcttaaatgaggagttgccttttaataaaaggaatatctacattaggggaagaagg
aaggtaaaaagtaaaagggttgctgatgtagttgaggcactaattggtgcatttcttagc
acaggtggtgaaatagctgccatacatttcatgaattgggttggtataaaggtggattta
gtccatacaccatatgagaggcacttccaagtgcagccagagaagctcattgatgtcaga
catttagaatccctgcttaacaactattcctttcgtcatcctcatcttctactggaagca
ctaacccatagatcttacatgcttcctcagattccaggatgttatgagcggctagaattt
cttggtgatgcagtgttggattatgcgatcactgtttacttgtacaataagtatcctggt
atgtcaccaggagttttaactgatatgaggtctgcttctgtgaacaacaattgttatgcg
ctatctgcagtgaaagctcgactacacgaacacattcttgcttcggacaatgtccacagc
aatattgccaacactgttaacaattttgagaggttatccatggaatcaacttttggatgg
gaatctgacacatctttctgcgaggtacttgcagatattattgagtctctagcgggggca
atttttgttgattctgaatatgataagaatgccgtctttcaaagtatacgtcctctttta
gagccgttggtttctccagaaacgatgccgctcaatcctgtaagagagttccatgactat
tgccaaaaaatgcagtatattatgaagaaacctgtgaagtccatccaaaacggcgtggct
accaggacaatagaggttgaagcgaacggggttgtcaaatacacatatacatcaacagct
tctaataacgatacagcaaaaagattagcttgcaaagaatttttgaggttgtcgaaagga
aactaa
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