Prunus mume (Japanese apricot): 103339335
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Entry
103339335 CDS
T03196
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pmum
Prunus mume (Japanese apricot)
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmum03016
]
103339335
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
103339335
Transfer RNA biogenesis [BR:
pmum03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
103339335
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GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
PepSY_2
Motif
Other DBs
NCBI-GeneID:
103339335
NCBI-ProteinID:
XP_008240831
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Position
LG1:20936660..20944136
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AA seq
795 aa
AA seq
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MAVRAVSSCSIFRSASTSSSSPTLFAFRCSPCHFSRRFSQFSIRFPIFRSDKLVPGHGGL
QSSSVHSLVDSIMEELGALRRRRRVRAAAKVELTSSGGIVEDKLVNRTLQQGLLLEFKKD
SERVLLAVAQRPDGKKNWMVSDQNGVTSSIKPQQITYIVPGVENFDHAEISKFVQRAQEN
SDSALLEFAWVELLEKNKRVTPEELAEMIFGSVEPLECYCAHVMLSEDEVYFTVLETKGS
HSIYGPRPAVQVEELLRRKLAKEAAEKELQEFVQLLKSAKAMPLDAKPPKSSWMVEEKIR
QKIKSLESYAIDACTNDDQRKTAGMILRAMGMVKTASSALNLLINIGFFPVHVNLDLLKF
NTRTDHSDEVISAAESLLSDSYDPDEIERKDLTHLKVYAIDVDEADELDDALSATRLQDG
RIKIWIHVADATRFVQPGSIVDREAMRRGTSVFLPTATYPMFPEKLAMEGMSLQQGENCN
AVTVSVVLHSDGSIAEYSVVNSIIRPTYMLTYESASELLHLNLEEETELKILSEAATLRS
IWRRQQGAIGTATLEARIKVVNPEDPEPIINLYVENQADPAMRLVTEMMILCGEVVATFG
SSNNIPLPYRGQPQSNIDTSAFAHLPEGPVRSSALVKLMRAAEIDFRKPIRHGILGLPGY
VQFTSPIRRYMDLLAHYQVKAFLIGKSPPFSAGQLEGMASIVNMNARVAKKLFSSSLRYW
ILEFLRRQPKEKRYRALILRFIKDRIAAVLLVEVGLQSSVWVSVGADVGDEVLVRVEEAH
PRDDVLFLKEIVIES
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcgagccgtcagcagctgttcaatctttcgctccgcttccacttcctcttcg
tcccctactctcttcgccttccgctgctccccatgccacttcagtcgccgcttctcccaa
tttagcattcgcttcccgatatttcgatccgataagttagttcctggccatggcggcctt
caaagcagctccgttcacagcctcgtcgacagcatcatggaagagctcggtgccttgcgc
cgacggagacgagttcgcgctgccgccaaggtggagctgacaagcagtggagggattgta
gaagataagcttgtgaaccgaacgctgcagcaagggttgctgctcgagttcaagaaggat
tcagagagagtattgcttgctgttgcccagagacccgatggcaagaagaattggatggtt
tctgatcagaatggtgttacatcatccattaaaccacaacaaatcacatatattgttcct
ggtgttgaaaatttcgaccacgcggagatttcaaagtttgttcagagagctcaggagaac
tcggactcagcacttctagaatttgcttgggttgaactcctcgaaaagaataagcgtgtg
acgccagaagaattagctgagatgatctttggtagtgtggagcctcttgaatgctactgt
gctcatgtgatgctttcagaagatgaagtatacttcactgtgctagagacaaaaggttct
cactctatatatggacctcgacctgctgtgcaggttgaggaacttctccgtaggaagctc
gcaaaggaggcagctgagaaagaactgcaggagtttgtacaattactgaaatctgctaag
gcaatgcctttagatgctaaacctcccaaatcttcttggatggttgaagagaaaatcaga
cagaaaattaagtctcttgaatcgtatgctattgatgcctgcacaaatgatgaccaaagg
aaaacggctggaatgatcctaagggcaatggggatggtgaaaacagcatcatcagctcta
aatctcctcataaatattgggttttttcctgtacatgtgaatcttgacctgttgaagttc
aatacccgtactgatcactcagatgaagttatatcagctgcagaaagtcttctgtcagat
tcatatgatccagatgagattgaaaggaaagatctcactcacttgaaggtctatgctatt
gatgtggatgaggctgatgagcttgatgatgctctgagtgcaacgaggctgcaagatgga
cgcattaaaatatggattcatgttgcagatgcaactaggtttgttcaacccgggagcata
gtagacagggaagcaatgagaagaggaacttctgttttcttgcccactgccacttatcct
atgttcccagagaaacttgccatggagggaatgagtttgcaacaaggagagaattgcaat
gcagttacagtatctgttgtgctgcattctgatggcagtattgcagaatattcggtggtc
aactcaatcattagaccaacttacatgttgacgtatgagagcgcatcggagcttcttcat
ttaaacctggaagaagagactgaactgaaaatcctgtctgaggcagcaactctccgttca
atatggcgtcgccaacagggtgcaattggcacagccacattggaagcacgtatcaaagtg
gttaatccagaggatccagagcctattattaatctgtatgttgaaaaccaggcagaccct
gcaatgcgacttgtcactgagatgatgatactctgtggagaagttgtggccacatttggt
tctagcaataacattcctttaccctacagaggacagccccaatccaacatcgacacatct
gcatttgcacatcttccagaaggacctgttagaagctctgctcttgttaaactaatgcgt
gctgctgaaattgatttcaggaaacctatacgccatggaattttaggacttccgggttat
gttcagtttacatctcccatccgtagatatatggatttactagctcactatcaggttaaa
gcatttctcatcgggaaatctcctcctttctcagctggtcagttggaagggatggcatct
atagtgaatatgaatgctagagtagcaaagaagctctttagcagcagtcttcggtattgg
atattagaatttctgagaaggcagccaaaagaaaaaagatatcgtgcattgattcttaga
ttcattaaggatcggattgcggccgtattgttagttgaggtgggacttcaatcttccgtg
tgggtatctgtgggagcagatgttggagatgaagttctagttcgggtagaagaagctcat
ccacgtgatgatgtgcttttccttaaagagattgtcattgagagctaa
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