Prunus mume (Japanese apricot): 103339383
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Entry
103339383 CDS
T03196
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum00040
Pentose and glucuronate interconversions
pmum01100
Metabolic pathways
Module
pmum_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103339383
Enzymes [BR:
pmum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
103339383
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
103339383
NCBI-ProteinID:
XP_008240888
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Position
LG8:6220469..6223404
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AA seq
451 aa
AA seq
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MAPQEIDLIPFFFIILSFVSCSLQDIPLNKYVEEASQFGSQAYPSYFDMIDDGGNFSKDL
IKQSSDVLSLKSFDKVDGNSASVNVNDFGAEGDGETDDTEAFEKAWKAACSSNDEAVLVV
PEKIYHLKPIRFSGPCKSEVTVQILGTLKASDNRPDFGQDGRHWLVFDTVRNLLVEGGGV
INGNGEQWWQNSCKINKSKPCEDAPTALIFQKCKNLRVNNLNVQDAQQIHVSFQKCMNVQ
ASNLSIIAPEKSPNTDGIHVTDTQNILITNSVIATGDDCLSIVNGCEKVQAKNITCGPGH
GISIGSLGSRNSKAYVSEITVNGAVFSGTTNGVRIKTWQGGSGSASNITFENIEMHNVSN
PIIIDQNYCDRKTCKEQRSAVQVENVVYKNISGTSASDVAIKFDCSKSFPCKGIVLQGIN
LQREGGKAAKASCNHVNVNSIGDVSPLCDYS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcaagaaattgatttaatcccattctttttcatcatcctctcttttgtttcc
tgcagtttacaagacatcccactcaacaagtatgttgaggaagcatctcaattcggttcc
caagcttatccttcatacttcgacatgatcgatgatggcggtaacttctccaaagacttg
atcaagcaaagttcagacgtcctaagtttgaagagcttcgataaagtggatggcaattca
gcttcggtaaatgtcaatgattttggagctgagggtgatggagaaactgatgacacagag
gcgtttgagaaggcttggaaagccgcttgttcatctaatgatgaagctgttctggtggtg
cctgagaagatctatcaccttaaaccaattcgattttcaggcccttgcaaatctgaagtt
acggttcagattcttggaaccttaaaggcttctgataaccgacctgacttcggccaagat
ggtagacactggcttgtctttgataccgtccgaaatttattggttgaaggtggtggagtc
atcaatggcaatggggaacaatggtggcaaaactcatgcaaaatcaataaatctaagccc
tgcgaggacgcaccaacggctctcatctttcagaagtgcaagaatttgagggtgaataac
ctgaacgtacaagatgcgcaacaaattcatgtgtctttccagaagtgcatgaacgttcaa
gcttccaatctctcaataattgcaccagagaaaagccccaatactgatggaattcatgtc
acagatacgcaaaacatactcatcacgaactctgtcatagccacaggtgatgattgtctt
tcaattgtaaatggatgcgaaaaggtgcaagccaagaacattacctgtggaccaggtcat
ggaatcagtattggaagcttgggatctcgaaattcaaaagcttatgtttcagaaattaca
gtgaatggagctgtattttctggaaccacaaatggggttaggattaagacatggcaggga
ggatccggaagtgcaagcaacatcacatttgagaacattgaaatgcacaatgtttccaac
ccgataattatcgaccaaaactactgcgacagaaaaacttgcaaagaacagagatcagca
gttcaagtggaaaatgtggtgtacaagaacattagtggaacaagtgcttcggatgttgcg
ataaaattcgattgcagcaagagcttcccttgtaaggggattgtgttgcaaggtattaat
ctccagcgcgaaggagggaaagcagctaaagcatcatgcaaccatgtcaatgtgaatagc
ataggagatgtttctccactttgcgattatagttag
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