Prunus mume (Japanese apricot): 103339416
Help
Entry
103339416 CDS
T03196
Name
(RefSeq) DNA polymerase delta small subunit isoform X1
KO
K02328
DNA polymerase delta subunit 2
Organism
pmum
Prunus mume (Japanese apricot)
Pathway
pmum03030
DNA replication
pmum03410
Base excision repair
pmum03420
Nucleotide excision repair
pmum03430
Mismatch repair
pmum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103339416
03410 Base excision repair
103339416
03420 Nucleotide excision repair
103339416
03430 Mismatch repair
103339416
03440 Homologous recombination
103339416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmum03032
]
103339416
03400 DNA repair and recombination proteins [BR:
pmum03400
]
103339416
DNA replication proteins [BR:
pmum03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
103339416
DNA repair and recombination proteins [BR:
pmum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
103339416
MMR (mismatch excision repair)
DNA polymerase delta complex
103339416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
103339416
NCBI-ProteinID:
XP_008240932
LinkDB
All DBs
Position
LG8:complement(6687617..6692703)
Genome browser
AA seq
441 aa
AA seq
DB search
MEAMEIDSEKNLQRKHSTYNLLDERFEIQKEMYRGQQYSQIYFVRLHMMRTLLYSLVPNW
KPHLPVCTVLGLEKDKECIVVGTLYKHMKLKPCILDEYSKTRSTTPLVKPHNFVHPDDHL
VLEDESGRVKLAGMLSPSVYVTGSIVGLHGKETDAGDFLVLDVLEAGLPPQIELPLKSRE
DKYVVFVSGLRVGSSFSNPLQLQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSIEVPRG
LLNGQNLASKDQSKLSEPIKELDILLTQIAAGLPLDIMPGLDDPANFALPQQPLNRCLFP
GSSAYNTFRSCTNPHCFDLDDIRFLGTSGQNIDDLEKYSEAKDKLEFVERTLRWRHLAPT
APNTLGCYPFTDRDPFLIESCPHVYFIGNQDKYDSRLIKGSEGQMVRLICIPKFCETGVA
VVLNLGNLECHTLSFGTHFSS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggaagccatggaaatcgattcggagaagaacctccagagaaagcattccacctataac
ttgctggacgagaggtttgagattcagaaagagatgtacaggggtcagcagtacagccaa
atatactttgtacgtctccatatgatgaggaccctcctctattcccttgtccctaattgg
aaaccccatttaccagtttgcacagttttgggattggaaaaggacaaggaatgcattgtt
gttggaaccctgtacaagcacatgaaactcaaaccttgtattcttgatgagtactctaag
acgagatctacgacaccacttgtcaagcctcataattttgtgcacccggatgaccatctg
gttttggaagatgaaagtggaagagtaaagcttgctgggatgctttcaccttctgtatat
gtaacagggagtattgttggtttgcatggaaaggagactgatgctggtgacttcttagtc
ctagatgttcttgaagctggcttgccaccccagatagagctgccacttaaatcaagagaa
gacaagtatgttgtctttgtgtctggacttcgtgttggaagcagcttttcaaaccctctt
cagttacagcttcttgttgatcatattacaggacatttaggagatgagaaggagcaaggt
attgcagcacaaatagttcatgttgttattgctggaaattctattgaagttcctcgagga
cttcttaatggacagaatttagcgtcaaaggatcaatcaaagctgtctgagccaattaag
gagctggatattttgttgactcagattgctgcaggtttgcctttggatatcatgccaggt
ctcgatgaccctgctaattttgccttgccgcagcagcctttgaaccgatgccttttccct
gggtcatcagcttataacacatttagatcatgtactaatccccattgctttgatcttgat
gatatcagatttcttggaacatcgggtcaaaatatagatgatcttgaaaagtattcagaa
gcaaaggataaacttgaatttgttgaaaggacattgaggtggaggcatctggcaccaaca
gcacctaatactcttgggtgttatcctttcacagacagggatcctttcctgattgagagt
tgccctcatgtttacttcattggtaatcaggataaatatgatagccgcttaataaaggga
tctgaagggcagatggtgagactcatttgcattcctaaattctgtgagacaggagttgct
gttgtgctaaacttgggaaatcttgaatgccatacgctcagttttgggactcacttcagc
tcataa
DBGET
integrated database retrieval system
